Scyliorhinus canicula (smaller spotted catshark): 119953136
Help
Entry
119953136 CDS
T11175
Name
(RefSeq) LOW QUALITY PROTEIN: microtubule-associated protein 1B-like
KO
K10429
microtubule-associated protein 1
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Pathway
scau03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
119953136
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
scau01009
]
119953136
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
scau04812
]
119953136
Protein phosphatases and associated proteins [BR:
scau01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
119953136
Cytoskeleton proteins [BR:
scau04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule-associated proteins (MAPs)
119953136
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MAPB1_N
Anti-Pycsar_Apyc1
Lactamase_B_6
Motif
Other DBs
NCBI-GeneID:
119953136
NCBI-ProteinID:
XP_038632953
LinkDB
All DBs
Position
18:complement(112417874..112440426)
Genome browser
AA seq
1507 aa
AA seq
DB search
MAAPQRGSGSGSGQQRPASALVVLGESGRPELLRDAIVQVQRGILSWDIDAADFSLDEQL
KLFVSRHSATFPDEEKGQKILHHRGDALETLVLINPSNECLCAEVRTLISAESRHKLLVL
AGPCLEGSGDLLLQKGSFTFQDFIQIFTDKEIGELLSFTPPANKASLTLACPDLGEWKKS
SLEKHSLQEFIEIRLNPPVSQLEMEGLQEFLEYLSETMESSSPFDLLEPPATVGFLKLSK
PCCYIFPGGRGDSAFFAVNGFNILVDGGSDQKSSFWKLVRHLDRVDSVLLTHIGTDNLPG
INSLLQRKLAELDEDQSLGSEVNGDWMKHLISPEIGVMFLNAPERLQHIERNNVRRSVDE
VSVTLQYLDLLRIEPLPLYRTVGNALEPIILFQKMGVGRLEMYILNPTKGSKGLDFLMQQ
WTGNGWPKGGDTPIQCLVSVCALIVWHPASKMEKIIRVLFPGCTPQDKILEGLERLKHLE
FLKQPSATKSELEALQKDKGPKPKRAESRESLKSLTKAGCNSASSLVGARPGSARDKHRV
ERKDKPGKPKADTATASEGAKESHSNMSAELKARDQLGDKLKADTKPKLQKKEVKSMKME
ESKDGRVSKRDERRETEEKKLVRKDVAKQVKKEPKNDEGTGAKTSLKKMSAVSANGRKSS
AKANVPNKEVRKDPNPAKGPVKVKPKVQKKGSAAECKQAPGSVSLSEKGVELGASKLSTP
EDMTADFEKLEPAGPEVQAGDVEVLNQAKTVLEGSEGTVMVPDEPSPDEGFTTMENESEL
ESSPQGDDQVVNAGVMASEEAVVLEWPEVQKGCKEEKLEARGDAKAESDQGMIRINHING
LICDTENEDGFEMENPDKFGYFDEKLSPSRNMAALSPLAKTPRSDRSVNFDLTPTELGPP
DEMKGQMFVNNQEILEDHCASSEERTLEMVSPPGSGPASAGHTPFHQSPIDEIIPRSEDG
LIERVSSLLDEETQLNNACNKPVDGGPQSNARLHFENANAPLDRHAGYLTLSPFKEIVPD
VSPTLTTPSLPAEVGSPHSTEIESLSVSFEQVLPPLSEALTSPREDNQRGPLNGLSPEHE
ALSGKGDPPGMSLPLKSLQDTFRPPQVLPVHSSADGDCALAHGDGVDGHLPRVVGLPSES
PHDVDLCLVSPCEFKHPKTELSPSFINPSPRELSDESDLSQEFAKPIVQRRGHKSPSSRK
AALDERTPTSASESLPTLSGSDAQRGTEDCPSITADGGIDSEEDSESLPADRSHPPLSSR
PPDPPPAPMKDPHPPPPQPGTCMVDPEVLTQNSTKNVSERTKGKKLGSKPTVGSAARKTE
NTKQSTLSKPKGPQLTSKEVDKLATSNKSGQPGKVSRVNSNQSINSEEKKGRNPQTTSSK
PLRNTVTGPVSKCPPVAPPVYVDLAYIPNNYSARTINTDFFRRLRSSIYVTEXEISMRNI
LDSLLEGKAVWGNNIQVTIIPTFDSPIMHEWYQETHERQQSLNITVLGSNSTVVMQEETF
PACKVEF
NT seq
4524 nt
NT seq
+upstream
nt +downstream
nt
atggcggctccgcagcgaggaagcggctccgggagcgggcagcagcgcccagcctccgcc
ctggtggtgctgggcgagtccgggaggcccgaactgctgcgagatgccattgtccaggtc
cagcgggggatcctctcctgggatattgatgctgctgacttcagtctggatgaacaactc
aagctctttgtgtccagacactctgctacctttcctgatgaagaaaaaggccagaagatc
ctccatcaccgtggtgatgctctggaaacattggttttgataaacccctcaaatgaatgt
ctgtgtgctgaggtacggactctgatatctgcagaatcgagacacaagcttctggtgttg
gctggaccgtgtctggagggatcgggtgacctactcttgcagaaaggatccttcacattc
caggacttcatccagatcttcacagacaaggagatcggggagctgttgagtttcacacca
cctgccaacaaggccagccttactcttgcctgccctgacttaggggaatggaagaaatcc
agcttggaaaaacacagtctccaagagttcattgagatcaggctgaaccctccagtctca
cagctggagatggaagggttgcaggaattcctggagtatctctccgaaaccatggagtca
tcttcgccctttgacctgctggagcccccggccacggtgggcttcctgaagctctccaaa
ccttgctgctacatcttccccggaggccggggggactctgccttctttgccgtcaatggc
ttcaatattctggtggatggggggtcggatcagaaatcctcgttctggaagcttgtgcgt
cacctagaccgggtcgactctgtcttgttgacccacatcggaactgacaacttgcccgga
atcaatagtttgctgcagaggaagttggcagaactggacgaggatcaatctctcggctct
gaagtgaacggcgattggatgaaacatcttatttctcctgagatcggtgtcatgtttctc
aatgcacctgaaaggctccaacatattgagagaaataatgtccgtcgaagtgttgatgag
gttagtgtgacgctacagtatctggatctactgcgtattgaaccgctgccactttataga
actgttggcaatgctttagaaccaatcattctctttcaaaagatgggagttggacgtctg
gagatgtatatccttaacccaactaaaggcagtaaaggcctggacttcttgatgcaacaa
tggacaggcaatggttggcccaaaggaggggacactccgattcagtgcctggtgtccgtt
tgtgctcttattgtttggcacccagcaagtaaaatggagaagataatcagagtactgttt
cctggttgcactcctcaagacaagatattggagggactggagaggctgaagcacctggaa
ttcttgaagcaaccctcggctaccaagagtgaactggaagctcttcaaaaagacaagggc
cccaaacctaaacgggcagaaagtcgggagagtctcaaaagcctcaccaaggcgggatgt
aattctgcgtctagcctggtgggggcaaggccagggtctgccagggacaaacacagggtg
gagaggaaggacaagcctggcaaacccaaagctgacacggcaacagcaagcgagggagcg
aaagagtctcattcgaatatgtcggcagaactgaaggctcgagaccaacttggtgacaaa
ctgaaagcggacaccaagccaaaactgcaaaagaaagaggtcaaatcaatgaaaatggaa
gagagcaaggatgggagggtctctaaaagggatgaaagaagagaaactgaggagaagaaa
ctggtgagaaaagatgtggcaaagcaagttaagaaggagcctaaaaatgacgaaggaact
ggagcaaagacttcccttaaaaaaatgtctgcagtttctgctaacggcagaaagagttca
gcaaaagccaatgtgccaaataaagaggtccgaaaggatcccaatcctgcaaaaggacca
gtcaaagtcaaacccaaagttcagaaaaaggggtctgcagcagaatgcaagcaggctcca
ggcagtgtatctctctcggagaagggagttgaactgggcgcctccaagttgtccacacca
gaggacatgacagcagattttgaaaagctggagccagccggaccggaggtgcaggctgga
gatgttgaggtattgaaccaggcgaagacggtgttggaagggagtgaggggacagtgatg
gtgccagatgaaccgtcgcctgatgagggctttaccacgatggaaaacgaaagtgagctc
gaatcttctccccaaggtgacgatcaagttgtcaacgctggcgtcatggcaagtgaggaa
gccgtggtcttggagtggcctgaggtgcagaagggatgcaaggaagagaaactggaagcc
agaggtgatgccaaggctgaatccgatcaaggtatgattagaattaatcatattaacggt
ctgatctgtgatactgaaaatgaagatggttttgagatggaaaatcctgataagttcggg
tactttgatgaaaagttgagccctagtaggaacatggcggccctttcacctcttgctaag
accccacggagtgatcgtagtgtcaattttgacttaacaccaactgagcttgggccacca
gatgaaatgaaagggcagatgtttgtcaacaaccaggagattctggaggaccattgtgca
agctctgaggagaggaccttggagatggtgtctcctccaggatctggccctgccagtgct
ggccacacccctttccatcaatcaccaattgatgagatcattcccagaagtgaagatggt
ttaattgagagagtgtccagcctcctcgatgaggaaacccagttgaataatgcctgtaat
aagcctgtagatggtggaccccagtcaaacgcgaggctgcattttgagaatgccaatgct
ccgctggacagacacgctggctatctgaccttgagtccattcaaggaaattgtccctgat
gtctcgccaactctgacaaccccttcattgccagctgaagttggttctccacattccaca
gaaattgagtctctgtccgtctcctttgaacaggtactgccacctctgagtgaagctctg
acctctccaagagaggacaatcagaggggacctctcaatggtctttctcctgaacacgaa
gcactctctgggaaaggcgaccctcctggcatgagcctgcccttgaagtcattgcaagat
acgtttcggcctccacaggtgctgccagtccattcctcggcagatggggattgtgcatta
gctcatggcgatggagttgatgggcatttgccacgtgtggtgggccttccatctgaatcc
cctcatgatgttgacttgtgtctcgtgtcgccgtgtgaatttaagcacccaaagactgaa
ctctccccttccttcattaaccccagtccacgagagttgtcagatgagagtgatctttca
caggaatttgccaagccaattgtgcaaaggagaggtcacaagtctccctccagtagaaag
gcagcgctggacgaaaggaccccaacctcagctagcgagtccctcccaaccctctctggt
tctgatgcccaacgtgggactgaggactgcccatccatcactgccgatgggggcattgac
tcagaggaagactctgagagccttcctgccgacaggtctcatccacccttgtcctccaga
ccacctgacccccctcccgccccaatgaaagaccctcacccacccccaccccaacctggc
acctgcatggtagaccctgaggtgctgacccagaactctaccaaaaacgtctccgagagg
acgaaaggcaaaaaattgggttccaagccgactgtgggctcagctgcgaggaaaactgaa
aacactaaacaatcgactctctccaaaccaaaaggtccccagctgacgtcaaaggaagta
gataaattggccacgagcaataagagcggccaacctggaaaggtgtcccgggtgaattcc
aaccagtcgatcaattctgaggagaagaagggaaggaatcctcaaaccacaagctccaaa
ccacttcgcaacactgtcacaggtccagtgagcaaatgccctcctgtggcgccacctgtg
tatgttgaccttgcctacatccccaataactacagcgccagaacgatcaacacagacttt
ttcagaaggctgagatcttcaatctatgtcacagaannagagatatccatgaggaacatc
ctggactcgctcttggaaggcaaagcagtgtgggggaataatatccaggtcaccataatc
ccgacctttgactctccaattatgcacgagtggtaccaggagacccacgagaggcagcag
tcattgaacatcactgtgttggggagcaacagtacggttgtcatgcaagaggagaccttt
ccagcgtgcaaagttgaattttga
DBGET
integrated database retrieval system