Scyliorhinus canicula (smaller spotted catshark): 119953234
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Entry
119953234 CDS
T11175
Symbol
rx1
Name
(RefSeq) retinal homeobox protein Rx1 isoform X1
KO
K09332
retina and anterior neural fold homeobox protein
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
scau03000
]
119953234 (rx1)
Transcription factors [BR:
scau03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
119953234 (rx1)
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GFIT
Motif
Pfam:
Homeodomain
OAR
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
119953234
NCBI-ProteinID:
XP_038633195
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Position
18:94842116..94858061
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AA seq
376 aa
AA seq
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MHREPMIQDLSFYYFMYNIPPAPTDRLSCNVQEAIVQIWERRFYPEYLGRTDASFEPEMN
GQVDEGCLSPGNFHEMVKSPGACSRVHSIDVILGFAKDQSLLGSSPLTPKSLPERGESHQ
TDCYHHHHIPGLGLREVTDRPHTFDDSRVLLNKCGEDLSELTSGTESEEKGEQTMNEVPP
KKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAMKVNLPEVRVQVWFQNRRAKWR
RQEKIEASTMKLHDSPMLSFGRPPMPPNVGPMGNSLPLDPWLTSPISNATSIHSIPGFMG
APQGLQTSYSGHTFLNSPPPMAQTMQPMGPPPYQCATTFVDKYPLEDVDQRSSSIASLRM
KAKEHIQSIDKSWQPI
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
atgcatcgagagccaatgattcaggatctatcattttattatttcatgtacaatatacca
cctgcccccacggatcggttgagctgtaatgtccaggaggcgattgtccaaatctgggaa
aggagattttatcctgaatatctaggccgcaccgatgcctccttcgagcccgaaatgaac
ggccaggtggacgagggctgcctctccccgggcaacttccacgaaatggttaagagccca
ggcgcctgttcgcgagttcacagcatcgacgtgatcctgggatttgcgaaggatcaatcc
ctgctcggctcctcgcccctcactcccaaatccctgccagagcggggggagtcccaccag
actgactgctaccaccaccaccacatccccggcctggggctccgggaggtgacagaccgg
ccacacacctttgacgactccagggttcttttgaacaaatgcggggaggacctcagtgag
ctcaccagcggcacagagagcgaggagaagggcgagcagacaatgaacgaggtgccaccc
aagaagaagcacaggaggaaccggactaccttcaccacctatcagctccacgagctggag
agagccttcgagaaatcccactaccccgatgtgtacagcagagaggagctggccatgaag
gtcaaccttcctgaggtccgggtccaggtatggtttcaaaataggagggcaaagtggagg
agacaagagaagatagaggctagcacaatgaaattgcatgattctcccatgctgtccttt
ggtagaccaccaatgcctcccaatgttggacccatgggcaactccctcccactggaccct
tggctgacatctcccatctcaaatgcaacctctatccacagtatacctggcttcatgggg
gcacctcaaggcttacagaccagctactcaggtcacacattcttaaattctccaccaccg
atggctcagacaatgcagcccatgggaccaccaccctatcaatgtgcgacaacatttgtg
gacaaatatcctttggaagacgtagaccagagaagttccagcatcgcttctttaaggatg
aaagccaaggagcatattcagtccatcgacaaaagttggcaacccatctga
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