Scyliorhinus canicula (smaller spotted catshark): 119953346
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Entry
119953346 CDS
T11175
Name
(RefSeq) LOW QUALITY PROTEIN: sterile alpha motif domain-containing protein 9-like
KO
K23949
sterile alpha motif domain-contaning protein 9
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
scau04131
]
119953346
Membrane trafficking [BR:
scau04131
]
Endosome - Lysosome transport
Others
Others
119953346
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SLFN_AlbA_2
Ta0938
TPR_19
Motif
Other DBs
NCBI-GeneID:
119953346
NCBI-ProteinID:
XP_038633461
LinkDB
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Position
18:complement(7257501..7278335)
Genome browser
AA seq
1546 aa
AA seq
DB search
MEELLKRRLEDWDENHVRTWLRYIRVKDEHIQTLYEEQVTGAVLQVINKGELKELRVKQG
LIQLILKKRNELLSSPSLELAQCSTSGVREREEASLTQDHQKDAPSQTLQTEALPDKRKL
KSQGDVTALETPDRSTDSQQIRCKPRPFVKDDINFKYVGNQVLPPETGIINLICPCHEYK
SLARAATLDRQRLQVKFAREVIKFASGCMNVRTNGTIHFGVEDSNSSSGYTHGEIIGLPV
KDRSIYVDALDYIEKCFPRLGEDARVCIRPPIFVEVISRDGTEGRFVIEIDVNSSIKVVK
NKIYRVRLPNFSEKKNKVECEKVTIYRRSGAKTEPVCEEDQDEFISGMQERDTRREAAEN
SDEPSKRICEDLGRKLSVLLTGGKKLMDNSQWYIIVMNKCNPEDLEKLNFLMHMNIFCVF
DFDPDSKTSGFFEHYLKHHTANVHFLQDYKREDRESMSDFRKRLCLFDQTSWIFCNGRND
YGGDERPCDVSTWVKSKKKHLKRTVFLICNEILPAGSFVVLFLLLSPVEQPLVDTFHEFY
AEMNGRNDIICIAECGDNYQKWANLAQPSCSIETIDKMSIVGMKLNHVNDTIQIMLPTLT
DHARHLPVSTKGVCLFKTADEERMFTLEIVSCDQCDDFKFDQQDPEQTTKIERDFYRGGK
VSWLNFMLAEKGFCEEVIQRDAYKEVVKIIDGMLKGSSGKQSVVTVHVFHQPGSGGSTLA
RQILWNSRKDLRCATVKPSCAVGKICEHAIQLLEYEENDINQCLPVLLLVEDADEDYFDE
IKHELIVAIGCKTVNVVRPVFILLNCRRCNNPEKRCKKFPLEAVAVTHKLTKEEKRVFSN
KRKKLEKQFEPEFILTFVLMSEEFPEEYIRDFVKHLLEGIDRPKLVTELIKYVALLNRYV
ANSSISLSHCEAFLGLGIPIDHLRQQSFETSLNDQAHLLFIHFRDCTTEIRSIRIVHPLV
AKEILHQLSDQPLSQLAMNLLQQKAFLKHRFARDEFIKFIRDLFIRRHKRSQGDSTDTIF
SPLIEDIRNEEKAPEKAVEVLTAAYECFEKDPYFAQQLARLHYIDKHFADAIKWAEDAKH
QLPHNSYILDTEGQVYRRXQLNVLFDLTALRTEEVPPDKLTEAIRIALKAIECFRAAQKA
AQSEADSMNNAGFVGEVEVGCHLLQLLSLLDIFKKDEDGSYTKLIEYLLGKDIPEEVKEP
WKKFHGKLKGLQNXIYEALEWMSDDSSYFQTNKYEDGEDESSNTEDLAHNPRKWLMKKTR
LFTRYFTLSEQEEQNLKQSSNCSLSPLVRQLRIYKYGGGNITSIFSLLSDQKTDRTADKL
EKIISLYPEDHQKEKLDNIDLVNFTLGHIALACVAPRSSKLLTYQKLRELSQQFWKNKYY
TSSACFLLTLLYWPDEACDQEPNEAKDRILNTALETMKRLHDIKMKNLPSRKKQIYTHFF
LGNGNGFDKIVHKSLLEKLTNSRLNERRMKWLTGDVWKNPTVTQKLKRVKGWTENGAIFV
RGHWKKNKIRIVALHFPSMPHGNENVTFYLGFTYAGLFANDIQVEH
NT seq
4641 nt
NT seq
+upstream
nt +downstream
nt
atggaagaattattaaaacgacgcttggaagattgggatgaaaaccatgtgcgaacctgg
ttacgatatattcgggtcaaagatgaacacatacaaacattgtacgaagaacaagtcact
ggtgcagtgctgcaggtgataaacaaaggtgaacttaaagagttgcgtgtaaaacaaggt
ctgatacaactgattttgaaaaaaaggaatgaattattgagtagtccgagtttagaactg
gcccaatgcagcacaagtggtgtaagagagcgagaagaggcttctttaactcaagaccat
cagaaagatgctcccagtcaaacattacagacagaggctctgccagacaaaaggaaattg
aaaagccagggtgatgttacagcattggaaacaccggaccgatccactgattcacaacag
atacgatgcaagcctcgcccatttgtcaaggatgatattaactttaaatatgtaggaaac
caagttcttccaccagaaactgggattataaatttaatttgcccctgtcatgaatataaa
tctctcgccagagctgcaaccctggacagacaacgattgcaagtaaaatttgcccgtgaa
gttattaaatttgcctctggatgcatgaatgttcgaactaatggtacaatacattttggg
gttgaagatagcaacagtagttctggatacacacatggggaaataataggcttacctgtc
aaagatcggagcatctatgttgatgcattggattacatagagaaatgtttcccacgatta
ggggaggatgcgagagtatgcattcggccccccatatttgtggaagtgatcagcagagat
ggaactgaaggaaggtttgttatcgagattgatgtaaactcatcgataaaggttgtgaaa
aacaaaatttatagagttcgtcttccaaattttagtgaaaagaaaaataaagttgaatgt
gagaaagtaaccatctacagacgaagtggagcaaaaacggaacctgtttgtgaggaagac
caggatgaatttatttcgggtatgcaagagagagacacaagaagagaggcggcagaaaac
tcagacgagccaagcaagagaatctgtgaggatctcgggagaaaactatcagtgcttcta
actggtgggaagaagttgatggataacagccagtggtacataattgtcatgaacaaatgt
aatccagaagatttagagaaattgaacttcctaatgcacatgaatattttttgtgtgttt
gactttgatcctgattctaagaccagtggcttctttgaacactacctaaaacatcacaca
gcaaatgttcacttcttgcaagattacaaacgtgaagatagagagagcatgagcgacttc
aggaaacgtttgtgtttatttgatcaaaccagctggatattctgcaatgggcgcaatgat
tatggtggtgatgaaagaccctgtgatgtgagtacttgggtgaagagcaaaaaaaagcac
ctgaagaggacagtcttcttgatctgcaatgaaattctaccagccggttcctttgttgta
ctttttctcctattgtcaccggtagaacagccgctagtggacacattccatgaattctac
gcagaaatgaatggtagaaatgatatcatttgtattgcagaatgtggcgacaactatcag
aaatgggccaatcttgcacagccttcttgcagcattgaaactatcgacaagatgagcatt
gttgggatgaaactaaatcacgtaaatgacaccatccaaataatgctgccaacattaact
gaccatgccaggcatttgccagtgtcaacaaagggtgtgtgtttattcaaaactgcagat
gaagaaagaatgttcacgctggaaatagtgagttgcgatcagtgtgacgattttaaattt
gaccaacaggatcccgaacaaacaaccaaaattgagagagacttttaccgaggtggtaaa
gtcagctggctgaatttcatgctggcagagaaaggattttgtgaggaggtaatacagcga
gatgcctacaaagaagttgttaaaattattgatgggatgctaaagggttcatcagggaag
cagtcagttgtcacagtacatgtatttcatcagcctggcagtggaggaagcaccctagca
cgacagattttgtggaattcccgaaaggacctgcgatgtgcaactgtgaagccatcatgt
gctgttgggaaaatctgtgaacatgccatccagctgcttgaatatgaagaaaatgacatt
aatcaatgcttaccggtgttgctacttgttgaggacgccgatgaagattactttgatgaa
attaagcatgaattaatagttgcaattggctgtaagacagtcaatgttgtgaggccagtc
ttcattcttttgaattgcaggagatgcaataatcctgaaaaacggtgtaaaaagttccca
ctggaagcggtggctgttacccataaattaacaaaggaagaaaagagagtgttttctaac
aaacgtaaaaaacttgagaaacaatttgagccagagtttatattgacattcgttctaatg
agcgaagaatttccagaagagtacattcgggactttgtgaaacatctgctagaaggcatt
gatcgccctaaactggtcactgaactgataaagtatgttgctttgctgaatcgttatgtg
gcaaattcaagcatttcactgtctcattgtgaagcatttttgggtcttggtattccaata
gatcacttgcgtcagcaaagctttgaaacctccttgaacgatcaggcacaccttttgttc
atacacttcagggactgtactactgaaattcggtcaatccgaattgtgcacccacttgtt
gcgaaggaaatactgcatcaattgtcagatcagcctctgagtcaacttgcgatgaacctc
cttcagcaaaaggcatttcttaaacacaggtttgcccgtgatgagttcattaaatttatc
agagacttgttcattcgacgtcacaaaaggagccagggtgacagtacggatactattttt
tctcctcttattgaagatatacgcaatgaggagaaagctccagaaaaagctgtggaagtt
ctgacagcagcttatgaatgctttgagaaagatccatactttgcacagcaactggctcga
ttgcattacatagacaaacattttgctgacgctataaagtgggctgaagatgcaaaacat
caactaccccacaattcttacattttggatacagaaggacaagtgtacagaagannacag
cttaatgtactgtttgatctaacagccttgcgaactgaagaggtccctcctgacaaactc
acagaagcaataagaatagctctaaaggcgattgaatgtttccgggctgctcaaaaggca
gcacaatcagaggcagattctatgaataacgctggttttgttggtgaggtagaggttgga
tgtcatctattacaacttctttcactgctggacatctttaaaaaagatgaagatggcagc
tacacaaaactaatagagtatcttctgggtaaagatattcctgaagaagttaaagaacct
tggaaaaagttccatggtaaattgaaaggcctgcaaaactgaatatatgaggcacttgaa
tggatgtctgacgattcaagctattttcaaaccaacaaatatgaagatggtgaagatgaa
agcagtaataccgaggaccttgcgcacaatcctagaaaatggctaatgaagaaaacaaga
ttatttacacgctatttcactctttcagaacaggaagagcaaaacttaaaacagagttcc
aattgttctttatccccactggtgagacagctacgaatttacaaatatggtggaggaaac
atcacatcaatcttttcactgttgtctgaccaaaagactgatcgaactgcagacaaatta
gagaaaataatctctctgtatcctgaagaccatcagaaagagaaactagataacatcgat
cttgtcaacttcacgctcggtcacattgcgctagcgtgtgtggcaccgaggtcttcaaag
ctgctaacatatcagaagctgagggaacttagtcagcagttttggaaaaataaatactac
acttcaagtgcctgttttttgctgactctgttgtattggcctgatgaagcttgtgaccag
gaacccaatgaagccaaggatagaatcttaaatacagcacttgaaacaatgaaaaggctg
catgacatcaaaatgaagaacttgccttccagaaaaaaacagatctatacgcattttttc
ttgggaaatggaaatgggtttgacaagattgttcataaaagtctgcttgaaaagctaact
aacagccgcctaaatgaaagaagaatgaagtggcttacaggagatgtatggaagaacccc
acggtcacccaaaagttgaagcgggtaaaaggttggacagaaaatggagcaatatttgtt
cgtggccactggaagaagaacaagatcagaatagtagctttgcatttcccgtcaatgcca
cacggcaatgagaatgtaaccttttaccttggctttacatatgctggactttttgctaat
gatatccaagtggaacactaa
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