Scyliorhinus canicula (smaller spotted catshark): 119953403
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Entry
119953403 CDS
T11175
Symbol
ticam1
Name
(RefSeq) TIR domain-containing adapter molecule 1
KO
K05842
toll-like receptor adapter molecule 1
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Pathway
scau04217
Necroptosis
scau04620
Toll-like receptor signaling pathway
scau04621
NOD-like receptor signaling pathway
scau05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
119953403 (ticam1)
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
119953403 (ticam1)
04621 NOD-like receptor signaling pathway
119953403 (ticam1)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
119953403 (ticam1)
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Gene cluster
GFIT
Motif
Pfam:
TRIF-NTD
TIR_2
RHIM
Motif
Other DBs
NCBI-GeneID:
119953403
NCBI-ProteinID:
XP_038633582
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All DBs
Position
18:complement(84992399..85052838)
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AA seq
699 aa
AA seq
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MAEGCARTPSLDDLFDILSGVTEQRLLSLWYKFSTANAKAKIHQLLYSIISFFLKKKDEA
ERAARSVLNEMPADRSALYIFNKIQGSGGGAEGEGEASEVSNEEFAGGDSGVLADLASML
AVLVEENLCKPSMRNQACQAAIKAFKSSNQDHSLDLRERIQEFRLLCGPLDFEGEGDNGE
VSPLKSIEEPSPSMRSTVACRTNPNQIPTDSLNNSEITVPSHFEISASPTASFISNSCQD
NLNSSMADPEENAVNPVNSANITLNNSKNVLNLSSDDYLGVEKVVDSIGARGGEQDIALS
VCSTPSSSGDQVNDLRPTQCTGRTSSDQIVTSKSKISGGQGTGDEVHANSISPGPSVDTT
KLLTGGQSNSSETMSAQAVDESFENKFYPFVVFHAPEDVEIAESVQVRLESLVKMEGATF
FEEFSLPGRSPIKCIEDAVNNSAFTILLLTNSFKNRWDEYKTNIVLINSINNEYKYNTVI
PMLPQKSRMPREDIPFALSAINRLDENSRHFERHVRKTFTREVLEKHKKIWLEEQTQKQY
QERLSQAQRELQKTLSAQMHYMELCTQLAQMQQLYPFAHPPYPGPTAVNGHTQPVLNPPP
YLDFSLLPPGLNPFLPSMLPKQPNFSPFIQPPFQVINPGNGQGGQNVTVSSSTQQQNQGT
NIIQIQHAKNVQIGDSNQMTITDSIESTDDEQDGDSDHS
NT seq
2100 nt
NT seq
+upstream
nt +downstream
nt
atggcagaaggttgcgctcgcaccccatctcttgatgacttgtttgacattttgtctgga
gtcacagaacaaagacttctcagcctgtggtacaagttcagtactgccaatgcgaaagca
aagattcaccaactcctgtacagcattatatcattcttcttgaaaaagaaagatgaggct
gagagagcagccaggtcagttttgaatgagatgccagctgacagatctgctttgtacatt
ttcaacaaaattcaaggttcagggggtggtgcagagggagaaggggaggcatctgaggtg
tcaaatgaagagtttgcaggtggagacagtggtgttcttgcagaccttgcttcgatgctt
gcagtgcttgtggaagaaaatctgtgcaagccgtccatgaggaaccaagcttgccaagct
gccatcaaagcattcaagtccagcaatcaagaccatagtttggatcttcgagaacgtatt
caagaatttaggttgctgtgtggtcctctggattttgaaggtgagggggacaatggtgaa
gtatcacctctgaagtcaattgaagagccaagtccaagtatgagatcaactgttgcatgc
aggaccaatccgaatcaaataccgactgactcacttaacaattcagaaattacagtaccc
agccattttgaaatcagtgcatctcccactgcatcattcatttccaattcatgccaagat
aatttaaactcctcaatggcagaccctgaagagaacgcagttaatcctgtaaattctgcc
aacataactttgaataattctaagaatgtattgaatctatcctctgacgattatttggga
gtggagaaggtggttgacagcattggagctcgaggtggtgaacaggacattgctctctca
gtttgttcaactccaagttcatcaggagatcaagtgaatgatctgagaccaactcaatgt
actggaagaacaagcagtgaccagatagttacttcaaagtcaaaaatatcagggggccag
gggacaggggatgaagtgcatgccaattccatatcacccggtccttcagtggacacgaca
aagctgttgacaggtgggcagtctaattcttctgaaaccatgtctgctcaggcagtggac
gagagctttgagaacaaattttacccttttgttgtctttcacgccccagaggatgtggaa
attgcagaaagtgtgcaagttagactggaatcattagtgaaaatggagggtgcaacgttt
tttgaggaattctctctccccgggcgatctccaataaagtgcattgaagatgcagttaac
aattctgccttcacaatcctcctcctcaccaacagctttaagaatcgctgggatgagtac
aagaccaatattgtcctgataaattcaatcaataatgagtacaaatataacactgtcatt
ccaatgctaccacagaagagtcggatgcctcgtgaggatatcccgtttgcactgagtgct
atcaatagactcgatgagaattccagacattttgaaagacatgtaagaaagacatttaca
cgggaagtccttgagaagcataagaaaatttggcttgaggaacaaacgcaaaaacagtat
caagaaaggctaagtcaggcccaaagagaacttcagaaaactctatcggctcaaatgcat
tatatggaattgtgcacccaactagcccaaatgcaacaactctacccattcgcacaccca
ccctatccaggacctactgcagttaatggacacacacagcctgtgctaaacccaccgccg
tatctagacttctctctattgccacctggcttgaatccttttttgccgtcaatgttacca
aagcagccaaatttcagcccctttatacaaccaccctttcaagtcattaatcctggcaac
gggcagggaggtcaaaatgtaactgtcagtagttcgacacagcagcaaaaccaaggcacc
aacataatccagattcagcatgccaaaaatgtacagataggggactccaaccagatgaca
ataacagattccattgagagcacagacgatgagcaggatggagatagtgaccacagttag
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