Scyliorhinus canicula (smaller spotted catshark): 119953451
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Entry
119953451 CDS
T11175
Symbol
grin2cb
Name
(RefSeq) glutamate receptor ionotropic, NMDA 2C isoform X1
KO
K05211
glutamate receptor ionotropic, NMDA 2C
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Pathway
scau04020
Calcium signaling pathway
scau04080
Neuroactive ligand-receptor interaction
scau04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
119953451 (grin2cb)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
119953451 (grin2cb)
04082 Neuroactive ligand signaling
119953451 (grin2cb)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
scau04040
]
119953451 (grin2cb)
Ion channels [BR:
scau04040
]
Ligand-gated channels
Glutamate (ionotropic)
119953451 (grin2cb)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Lig_chan
Lig_chan-Glu_bd
ANF_receptor
NMDAR2_C
SBP_bac_3
Motif
Other DBs
NCBI-GeneID:
119953451
NCBI-ProteinID:
XP_038633678
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All DBs
Position
18:40802035..40944967
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AA seq
1347 aa
AA seq
DB search
MEQILQTILFLCAVESAFAREASQPTVNVAVVLGGSWYHMEIRGSFNRETYQDLPIQINA
VTVIVNNTNPRSLITHICDVLTRSRIHAVIFEDDVESEAVAQILDFVSAQVSAPIIGMSG
GSTVVLTPKEQHSTFLQLGASMEQQIKVIFKVMEEYDWGSFAIITSFFPGYQEFINHIQL
FIETSHFGWEVEQTLTLEMTRNEDNSKTKRLLQQIDAQVLILYCSREEAEYLFELAEEVN
LLGPGYIWILPSITVGNIERVAKQFPVGLISVMTERWKMSLQQRVRDGVAIIAKGAESFY
KAYGYIPGPSADCKHATRGGRRNILYRHMLNISWEGKDFSFNKDGYLVRPSMIVMTLNRS
RFWEMVGRWENGLIRMKYPVWPRYGKFQQPVSDSGHLTVATLEERPFVIVEEVDPENGAC
VRNTVPCRKQANLSESIAEAYVKLCCKGFCIDILKKLAKTVKFSYDLYLVTNGKHGKKVR
GTWNGMIGEVFYQRADMAIGSLTINEERSEIVSFSVPFVETGISVMVARSNGTVSPSAFL
EPYSPAVWMMMFVMCLTVVALTVCIFEYYSPVGYNRNLMNGKITGGPTFTLGKSVWLLWA
LVFNNSVPIENPKGTTSKIMVLIWAFFAVIFLASYTANLAAFMIQEQFIDTVSGLSDKKF
QKPQDHYPPFRFGTVPNGSTERNIKNNYPDMHSHMTKYNQRSVTDALDSLKSGKLDAFIY
DAAVLNYMAGKDEGCKLVTIGSGKVFATTGYGIALQKSSKWKRAIDLALLQFLGDGDTHK
LHTVWLTGICENEKNEAMSSKLDIDNMAGVFYMLLVAMGLSLLVFAWEHLVYWKLRHHVK
KSSKTDFLLAISRGIYSCFNGVQEVSSPLHVASPIVSSSFSQANMLKMLQAAKDLVSSTN
VENSLENATKTIEHWTRTGENLENRFPKAPSQQIEGSQAIGRKPLSVPYIPSRHQLRCLP
VTLSPSLASEQEERWSDRPIIKYKSRPDSRYLASKPATVMHNPHPISPTEFPAHFRQARG
IDLRNDLKSPYIPYISNNALHYQDIYNRKYFSRRLSLPCRKLAGSSAGNVGPQSGTKTVP
AVKSSIGLTEKWPVGNLLPPVSHPYQANCSSCIRLYSESQPEELTSVSRRSSYIKATREL
EDNSRFQDRPGNSEKLGSRGGITDLFSSLNSEILEPAGDSVRQPSGPRERYHGQDKMHLY
CSSPSGPKYSQSSKLPSYREACLQNSAALRHASKELHQHSWLHSCPGPSMYVWHRRAGSQ
RFNWLIGSGHRSCDGGIVMKYLEKRTPPLGSPVREPTAGRRRMIHRGMRVRGSQELEAGG
AAISCSHLRKSCARFSSLESEEATVAV
NT seq
4044 nt
NT seq
+upstream
nt +downstream
nt
atggagcaaatactacagaccatcctcttcctctgtgcggtggaatctgcttttgccagg
gaggccagccaaccgaccgtcaacgtagctgttgtgctcggaggctcgtggtatcacatg
gaaatcaggggcagctttaatcgggagacctaccaggacctgccgatacaaatcaacgcc
gtcacggtgatagtgaacaacactaatcccaggagcctgatcactcacatctgtgacgtg
ctgaccagatccagaatccacgctgttatctttgaggatgacgttgaatccgaggctgtg
gcgcaaattctagactttgtctctgcacaagtatcagctccaatcataggaatgagtggc
ggctccactgttgtgctcactccaaaggagcaacattctacatttctacagctgggtgct
tccatggaacaacagatcaaggtcattttcaaagtaatggaagagtacgattgggggagc
tttgctatcattaccagcttcttccctgggtaccaggagttcataaaccacattcaactt
tttattgagaccagccattttggctgggaggttgaacagactctgacacttgaaatgaca
cgaaatgaggacaattccaaaacaaagagacttctgcagcagattgatgcacaggttctc
attctgtattgctcgagggaggaggcagaatatctgtttgaactggctgaggaagttaat
ctgctgggcccaggctatatctggatactgcccagcatcacagtgggcaacatagaacgg
gtggcaaaacaatttcctgttggtctaatcagcgtaatgacagagcgatggaagatgagc
ttgcagcagagggtgagggatggagtggcaatcatcgcgaaaggtgcagaaagcttttac
aaagcatatggatacatacctggaccaagtgctgactgcaagcatgcaactcgagggggc
agaagaaacatactgtacaggcacatgttgaacattagctgggaaggtaaagatttctct
ttcaacaaggacggctatttggtgaggccatcaatgattgtgatgacattaaacagaagc
agattttgggagatggttggaagatgggaaaacggtttgataagaatgaaatatccagtg
tggccaagatatggaaaattccagcagcctgtttctgatagtgggcatttaactgtcgcc
acactggaagagaggccgtttgtgattgtggaagaagtagatcccgaaaatggagcttgt
gtacggaatacagtgccctgcaggaagcaagcaaacctgagcgaaagcattgctgaggcg
tacgtcaaactctgttgtaaaggattctgcatcgacattctgaaaaaactcgcaaaaaca
gttaaattctcctatgacctttacctcgtgaccaatggaaaacacggaaagaaggttcgg
gggacctggaacggaatgattggagaggttttctatcagagagcagacatggccattgga
tctctcaccatcaatgaggagcgctctgagattgtgagtttctcagtccccttcgtggag
actggaatcagtgtgatggtggccaggagcaatgggactgtttccccatcggcctttctt
gagccctacagtcctgcagtgtggatgatgatgtttgtaatgtgtttgacggtggttgct
ctcacagtctgtatattcgaatactacagccctgttggatacaaccgaaacctcatgaat
ggcaaaataacaggaggtccaacatttacactagggaaatcggtgtggcttctctgggca
ctggtcttcaataactctgttcccattgaaaatcccaaaggaacaactagcaaaatcatg
gtcttgatctgggccttttttgctgtcatcttcctggcaagttacacagcaaacctggct
gcatttatgattcaagagcagttcattgatactgtctcgggtctcagtgacaaaaagttt
cagaagccccaggaccactatccgccattcagatttgggacagttcccaatggcagcacc
gagcggaatatcaagaacaactatccagacatgcactcccacatgaccaaatataaccaa
cgttcagtaacagatgctcttgacagcttaaaatcagggaagcttgatgcctttatttat
gatgcagctgttctcaattacatggctgggaaggatgagggctgtaagctcgttaccatc
ggaagtggcaaagtgtttgcaacgactggctatgggatagctttgcagaaaagctccaag
tggaagagggccattgacctggccctgttacagttcctgggcgatggagacacccacaaa
ctccacactgtctggctgacaggaatctgtgagaatgagaagaatgaggcgatgagcagc
aaactggatattgataacatggctggtgtgttctacatgctcctggtggccatgggcctc
agtctgctggtctttgcctgggagcatttggtgtactggaagctgagacatcacgtaaag
aaatccagcaagacagactttctgctggcaatcagcaggggaatatacagctgcttcaat
ggtgtacaggaagtctccagcccacttcatgtggcctctcctatcgtctcctccagcttt
tctcaagccaacatgttgaagatgttgcaggcagccaaagacttggtatcctccacaaac
gtggaaaattccttggagaacgcaacaaagacaatagagcactggacacgcacaggcgaa
aacctcgaaaacagattccccaaagcaccctcacagcagattgaaggatctcaggccata
ggcaggaaaccactttctgttccctatattcctagcagacaccagcttcgctgccttcca
gtgacattatccccatctctcgcttcagaacaggaggagagatggtcagatcgaccaata
attaaatacaagagccggccagatagcagatacctagcttcaaaacccgcaactgtaatg
cacaaccctcacccgatttcaccaactgagttccctgcacatttcagacaggccagagga
attgatctgaggaatgatttaaaatctccttacattccttacatcagcaataacgcattg
cattaccaggatatttacaacagaaaatatttttcaagaagactatccctgccttgtagg
aaattggccggtagctctgcaggaaacgttggccctcagagtgggacaaagacggtgcct
gcagtgaagtctagtattggattgaccgagaaatggccagtgggaaacctgctcccacca
gtgtcacatccctaccaggccaactgtagttcctgtatcagactttactctgaatcacag
ccagaggaattaacttcagtgagcagacgatcttcatatatcaaagcaacaagagaactg
gaggacaactcaagattccaagacaggccaggaaactcggaaaagctaggatcgcgagga
ggaattactgacttattctccagtctaaacagtgagatcctggaaccagcaggggactct
gtcaggcagccctccggtccaagagaaaggtatcatggccaagacaagatgcacttgtac
tgtagttcaccaagtgggcccaaatattctcagtcttccaagcttccctcctacagagag
gcatgcctacaaaactcagctgctctgaggcatgcctccaaagagcttcaccaacactcg
tggttgcattcctgtcctggtccctccatgtacgtctggcatcgccgagcgggctcccaa
cgcttcaactggttgattggctctgggcaccgatcctgcgacggaggcattgtgatgaag
tacttggaaaaaaggactccacctctgggcagtcctgtgagggagcccacagctggcagg
cgcagaatgatccaccgtgggatgagagtcaggggaagccaggagctggaggctggagga
gcagcaatcagttgctctcatttgagaaaatcgtgtgcaaggttttccagcctcgagtct
gaggaagccacggtggcagtctga
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integrated database retrieval system
