Scyliorhinus canicula (smaller spotted catshark): 119953773
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Entry
119953773 CDS
T11175
Symbol
xylt2
Name
(RefSeq) xylosyltransferase 2
KO
K00771
protein xylosyltransferase [EC:
2.4.2.26
]
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Pathway
scau00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
scau00534
Glycosaminoglycan biosynthesis - heparan sulfate / heparin
scau01100
Metabolic pathways
Module
scau_M00057
Glycosaminoglycan biosynthesis, linkage tetrasaccharide
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
119953773 (xylt2)
00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
119953773 (xylt2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
scau01003
]
119953773 (xylt2)
Enzymes [BR:
scau01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.2 Pentosyltransferases
2.4.2.26 protein xylosyltransferase
119953773 (xylt2)
Glycosyltransferases [BR:
scau01003
]
O-Glycan biosynthesis
Glycosaminoglycan
119953773 (xylt2)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Xylo_C
Branch
Motif
Other DBs
NCBI-GeneID:
119953773
NCBI-ProteinID:
XP_038634316
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Position
18:40492911..40634048
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AA seq
852 aa
AA seq
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MVVRIRPRKVARRYRAAAAAAVAILIVQTLAVWSFSGLESEEEKGREKRTKLPDSNEVDS
SDIRHLGPSRRLGREHPGSTTSILRTSLVRRKPAVRRRMPPRIHLDDTLQSDPSSSRNTS
DVKGESKNGDIGSVGGAPQPTSNNFSPNCDIVGKDALSALARASTQQCQKEITSVVCLHQ
AGKLMPHSVPRSCHLSGKPNSNIQWEDGNVDVASVQTPVRIVYVLVVHGRAIRQLKRLIK
AIYHRHHFYYIHVDKRSDYLHRETLKLAQHYPNIRVTPWRMVTIWGGASLLKMYLHCMKD
LLEMKDWEWDYFINLSATDYPTRTNDELVGFLSRYREKNFLKSHGRDNARFIKKQGLDRL
FHECDNHMWRLGDRQIPEGIVVDGGSDWFALTHKFVDYVVHTQDELVTQLKQFYWYTLLP
AESFFHTVLENSHMCETLVDNNLRVTNWNRKLGCKCQYKHIVDWCGCSPNDFKPQDFIRL
QQMTRPTFFARKFESSVNQEVIDILDSHLYGSYPPGTPALKAYWENVFDQMDGLSSLTDV
AITSYMGFFRLGLSNVQMLWRPGTDNHCRYEPVGHTISVHLYFYDDRFQGYLVMQQVKNV
TSGQKETLESWVVPRSMLHLPNIGPTLDRLQNLEVGTEWDPKERLFRNFGGLIGPFDEPI
AMQKWAKGSNMTATVVWIDPTYIVATSYDITVDSEAEYTQYKPPLNHPLRPGSWTVRVLH
LWVLLAETKFLVVPLAFSGKRPFRKEQDQWLHAGPPNNEYMDQSFQHLSGILNLPPPDVA
VKEAVNNAQLVGNSLESWVYESISKFWSATNTCAVEPSLCPLLPPCHKTAWSSLSDDPKS
ELGSVKGDGRLR
NT seq
2559 nt
NT seq
+upstream
nt +downstream
nt
atggtggtcaggatcaggcctcggaaagtcgctcggaggtaccgggcggccgcggccgct
gctgtcgccatcctgatcgtgcagaccctggcggtctggagcttcagcggcctggagagt
gaggaggagaaggggagagagaagagaaccaaactgccagatagcaatgaagtggacagt
tctgacattcgacatctggggcccagtcgacgactgggtagggagcacccaggcagcact
accagtatactaaggactagtttagtcagacgcaagcctgcagtgcggcgtaggatgcct
ccaagaatccatttagacgataccctccaaagtgatccatcaagcagcagaaacaccagc
gatgtaaaaggggagtcaaagaatggggacattggcagtgtgggaggcgctcctcagccc
accagcaacaatttttcacccaactgtgacatcgtggggaaggatgccttgtctgcgtta
gccagggcaagcactcagcaatgtcagaaagagatcaccagtgtggtctgtttacaccag
gctgggaaactgatgccacactctgttcctcgctcctgtcacctttcagggaaaccgaac
agcaacatccagtgggaagacggcaatgtggatgtggcatcagtccagaccccggttaga
attgtctatgtccttgtcgttcatggtagagccattaggcagctgaagcgactgatcaaa
gccatctatcatcggcatcacttttactatatccacgtggacaagcgttccgattacctg
cacagagagacgttgaagctggcccagcattacccaaacatccgggtaaccccctggcgg
atggttacaatctggggaggtgcaagtctgctgaagatgtacctgcactgcatgaaagat
ctacttgaaatgaaagactgggagtgggactatttcatcaacctgagcgccactgactac
cccaccaggacaaatgatgagttggtaggattcctctccaggtacagagagaaaaacttc
ttgaagtctcatggccgggataatgccaggttcatcaagaagcaggggttagatcgactg
ttccatgaatgtgacaatcacatgtggcgccttggagacaggcagattcccgaaggcatt
gtggtggatggtggttctgactggttcgccctgactcacaagtttgttgactatgtggtg
cacacgcaggatgagttggtcactcagctaaagcagttctactggtacacactacttcca
gctgagtccttctttcacacagtgctggagaacagccacatgtgtgagacactggtggac
aacaacctgcgagtcaccaactggaaccgaaaacttggctgcaaatgccaatacaagcac
attgtggattggtgcggctgctcaccaaatgacttcaaaccacaagacttcataagactt
cagcaaatgaccagaccaacattttttgctcggaagtttgaatcatcagttaaccaggaa
gtgattgatatattggactcacacctgtatggcagttaccctccaggaacaccagctctg
aaagcctactgggagaatgtatttgatcagatggacgggttgagcagcctcactgatgtt
gcaattaccagctacatgggtttcttcaggctaggcctgagcaatgtgcagatgttgtgg
cgaccaggaacagacaaccactgcaggtacgagcctgtgggacataccatctcagtccat
ctttacttctacgatgaccgattccaaggttatttagtgatgcaacaagttaaaaatgtg
acttcaggccagaaggagactctggagagctgggtggtacctcgttccatgctgcacctg
ccaaatattggcccaacacttgaccgactccagaacctggaggtgggaactgaatgggat
cccaaggagcgactgttccgtaactttggtggcttgatcgggccctttgacgagcccatt
gccatgcagaaatgggccaaaggcagtaacatgactgccacagtcgtgtggatcgatccc
acttacattgttgcgacatcctatgacataacagtggattcagaggctgagtacacacag
tacaaacccccgttaaaccacccactgcgccctgggagctggactgtgcgggtgctgcat
ctgtgggttctcctggcggaaaccaagttcctggtagtacctctggccttcagtgggaag
cgaccattcagaaaagaacaagaccagtggttacacgctggtccaccaaacaatgagtat
atggaccagagcttccagcacctaagtgggattctgaaccttcctccaccagatgttgct
gtgaaggaagctgtaaataacgctcagctagtcggaaattctctggaatcatgggtatat
gagagcataagcaagttctggtctgcgaccaacacctgtgcagtcgaaccttcactatgc
ccattactgccaccctgtcacaagaccgcctggagttctctatcagatgaccccaaatct
gaacttggatcagtcaaaggtgacggtcgcctgaggtag
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