Scyliorhinus canicula (smaller spotted catshark): 119953843
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Entry
119953843 CDS
T11175
Name
(RefSeq) sialic acid-binding Ig-like lectin 13 isoform X1
KO
K06549
sialic acid binding Ig-like lectin 5
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
scau04090
]
119953843
04091 Lectins [BR:
scau04091
]
119953843
CD molecules [BR:
scau04090
]
Proteins
119953843
Lectins [BR:
scau04091
]
I-type lectins (Siglecs)
119953843
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ig_3
ig
I-set
V-set
Ig_2
C1-set
C2-set_2
DUF4750
Motif
Other DBs
NCBI-GeneID:
119953843
NCBI-ProteinID:
XP_038634332
LinkDB
All DBs
Position
19:77547022..77602074
Genome browser
AA seq
505 aa
AA seq
DB search
MQFLLMLLLILQTGVQGVQIIGEVSQPQLVSVLRGESVTINCTFIYHGTDVNWIHTNWYR
NTPGSNYSYEMNKPTCSPDVSLGGLTHCVVSLKIENVSFEQSDSNYICVAKMPLIYPPIE
RRGQGTRIQIYEPPKISTIDSPLVAGRKSHLTCSVKALYSENISFTWTCHGTNSFTNITA
PTSKRTVNGTSVTSSQLEIIPNTADHGIICTCQINHVTFRQLVATEIKLHVMYAPQNLSI
MYRLSNGSNYQPLNSNSITVATYSFLELKCGVDSNPVSTVNWVKDNKNDTEVIQIESGLN
NSNLKITYLQLRDGGTYWCMANNSYGSGNSSVWINAVEKDYLLLFVLVPIIAVVGFISVI
TICFSLIWKRQLKDPVHGAVKISPETMDRCGNFNSESDIIYASVRRDNLPTSPKHSIVSL
SPKADYIIEYNNIEEENEEVSYADIVIHNPKRQGHNQWPKHTPDIKEKNTGKDFKHTHGS
SPHKHVDDTSEYSAIRISHQDLRTA
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
atgcaattcttattgatgctgcttttgattttacaaacaggggttcaaggtgtccaaatc
atcggggaagtgagtcagccgcaactggtcagtgtgctgagaggagagtcagtcacaata
aactgtacattcatttatcatgggactgatgttaactggatccatacaaactggtacagg
aacactccgggatccaactattcctatgaaatgaacaaaccgacctgtagtcctgatgtt
tctctgggtggtttgacccactgtgttgtttcactgaaaattgaaaatgtttcttttgaa
cagtctgattctaattatatctgcgtggcgaagatgccacttatctacccgccaatagag
agaagaggacaaggaacacggatacagatttatgaaccccctaaaatctccacgatagat
agtcctttggtagctggacgtaagtctcacctgacctgctccgtcaaggcattgtactct
gagaatatctcctttacctggacatgccatggaacaaacagcttcacaaacatcacagca
ccaacctcaaagagaacagtgaatggcacatctgtcaccagcagccagcttgagatcatt
cctaatacagctgaccatggaattatctgcacatgtcagataaaccatgtgactttcagg
cagctagtggcaactgagatcaaactacatgttatgtatgcaccacaaaatctcagcata
atgtacaggttgagcaatggtagcaattaccaacctctgaacagtaactccatcactgtc
gcaacctactcattcctggaactgaaatgtggtgtggatagtaacccagtttccactgtg
aactgggtgaaggacaataaaaatgacactgaggtgatacaaattgaatccggtttgaat
aattcaaatttaaagattacatatctccagctgagagatggaggaacgtactggtgtatg
gcaaacaacagctatggctcaggaaactctagtgtttggattaacgctgttgagaaagat
tatctattgctcttcgttctagttccaatcattgctgttgttggattcatcagtgtgata
acaatatgcttctctctgatctggaagagacaattgaaagatcccgttcatggagcagtc
aaaataagtcctgaaaccatggacaggtgtggaaatttcaacagcgagtctgatataata
tatgcatcagtcaggagagataatctaccaaccagtccaaaacattcgatagtttcttta
tctccaaaagcagattatattattgaatacaacaatatagaagaggaaaatgaagaagtg
tcgtatgcagatattgtcattcataatccgaagcgacaaggccacaatcaatggcccaag
cacacccctgatataaaagagaaaaatactgggaaagacttcaaacacacacatggttca
tctcctcacaaacatgttgatgatacctctgaatattctgcaatccggatttcacatcag
gatttaagaactgcttga
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