Scyliorhinus canicula (smaller spotted catshark): 119953844
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Entry
119953844 CDS
T11175
Symbol
med1
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 1
KO
K15144
mediator of RNA polymerase II transcription subunit 1
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
scau03021
]
119953844 (med1)
Transcription machinery [BR:
scau03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
Middle
119953844 (med1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Med1
DUF3915
Motif
Other DBs
NCBI-GeneID:
119953844
NCBI-ProteinID:
XP_038634335
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All DBs
Position
19:complement(11329836..11380170)
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AA seq
1609 aa
AA seq
DB search
MAALQGFPVSVSYSHGGSADTSAGPLPQPPHAERSKEEATEAEKLSKMNSLLEKLHTKYS
QTRPWTETAKLVRQAMEKRGIMNTGGHQHLIACLETLQKALKVMSLPAMTDRLESIARQN
GLGSHLSPSGTECYITSDMFYVEVLLDSTGQVCDVKVAHHGENPVSCQELVQYLREKNFL
EFSKHLKGLVNLYKLPGDNKLKTKMYLALQSLELDLSKMAHMFRLATNASNLDTILQGSV
GYLTPRSGGHLMNLKYYIPPYDLFEEGTGASLNLNENNVPRSLGMNVFVTIEGHTGMCKL
PIAPLITGSHPTDNKGTPSFSSVTNTNSVDLPACFFLKFPQPIPVSAFCIQKLQNFLGIP
LFDPPATLVPLYELITQFVLSGKDGTSSTLKHNMRFYASLPGQQHCYFLNKDAPIHDGRC
LQGALLHKIPFRHPGQVPQILELIRHQVSYNTLIGSCVKRTVLKEDLPGRLQFEVCPLID
TSFSLSFQHPVNDSLVCVVMDVLDSRQVSCKLYKGLSDALICTDDFIARVVQRCMSIPVT
MRAIRRKAETIQADTPALPLIAETVEDMLKRNPPPATSPGYSTQLGNNPASGTTTPTSTF
PGPISTIFNLGNMGVKERHESGHGEDSFKVNQNPILTSLLQITGSVGSSIGSSPTPPGHT
PPPASSPASNTKNHPMLMNLLKDNPSQDFSTLYNSSPLERQNSSSSSPRIDVATSSTKQK
KKRTRSQTDKPKQQQTEEDFQRELISMDFDAPNSVFDVNLAGDSLDTPHITPAPSQCNTP
PTTYPSTVVHTQQSSMQRMVRLPSTDSIGADVTEILSDIAEQTAKLATTGDNCQSIGTPV
RDSSNSSHSAVNSTFDADVFQGESNENTYTDPADLIADATATPTSDSSNQFFPDGVDFLL
DNQSGNNFVSGYFDENSQSEDIDDSKSFASHPLASINVQTMSGDTGDRSKGSSHTDMVDF
SMFASGSKSLGPSDVVEHSGNQSPLLSTVEVGKMDKSQKQRCGKEGNGSSSSNLSGIGID
GKPGKRTRTPSNEGKSKEKPPKRKKTDSESKSPSHSVSSRPFTPPASTTGSKSPGSSGRS
QTPPSGATPPIPKITIQIRKEMVGKSSSHSQFGSGPSSSSKSHHSHSSNSSSSSKVKSNK
SEGSSSSKMSSSLYSGQSSTSSSQSKSSSQSMGKPSSSPVTKHGLTSSSSLSSSNSSSNK
MKPQVKSSSSLVNPSGGKPNVSPSHSRPSGNSDKLSSPLKPIPGTPPTKAKSPVSSGSGG
SHMSGSSSSSSMKQSSGMASSSSLSQKPPTSTSSSSSSSASSMSSSQNAHGHLIKGKSPS
RTKKPSLTAVIDKLKHGVGGVGGSGAEDCPDGQMAAATMPSTHSLPSKHNMSPADYQGKR
EKSDKEGKSKVSVSGSSGDSGKKSSDSKNGGGTGVAKIIISKHDGGSPSIKAKVTLQKPS
DGSGDGLRPQITGAKNYGSPLFSGSTPKHERCSPSYSKSPAYTPQGGDSGSESGSSFAEK
SHQNSPSSDDDIRPLPEYSLEKHKKHKKEKKKGKDKDRDRDRDRDRDREKKKSHSSIKPE
SWSKSPISTDQSLSMAGNTSLNSERSSRPSPAFLIGEDDDLMNVALIGN
NT seq
4830 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgctgcagggctttcccgtatcggtctcctacagtcacggcggctccgccgac
acctcggccgggccgctgccccagccgccgcacgccgagcggagtaaagaagaggcgaca
gaagctgagaagttgagtaaaatgaactccttgctggagaaactgcacacaaaatatagc
cagacaagaccctggactgagacagcaaaacttgtgcgacaagccatggagaaacgcggt
ataatgaacacaggaggccaccagcatcttattgcctgtttggagactctgcagaaagca
ttaaaagtcatgtctctgcctgcaatgacagaccgcctggagtctattgccagacagaac
ggccttggttctcacctgagtccttcaggtaccgagtgttacattacatcagacatgttc
tatgtagaagtgctgctggattcaacagggcaagtctgtgatgtcaaggtggcacatcat
ggagaaaaccccgtgagttgccaggaactggtgcaatatttgagagagaagaattttttg
gagttctcaaaacatcttaaaggtctcgtcaatctatataaactccctggggacaataag
ctgaaaactaagatgtacctggctctacagtccctagagcttgatctttcaaagatggca
catatgttcaggttagcgacaaatgcaagtaaccttgatacaatacttcaaggaagtgtt
ggttatcttaccccgaggagtggtggacacttaatgaacttaaagtactacatccctcct
tatgatctgtttgaagaaggaactggtgcatctctgaaccttaatgaaaataatgttccc
cgttccttgggcatgaatgtgtttgtaacgattgagggccacacaggaatgtgtaagctg
cccatagctcccctgatcactggctcccatcccacagacaacaagggcacgccttccttc
tcttctgtgactaataccaacagtgtggaccttccagcctgtttcttcctaaaatttcca
cagccaattcctgtatcagctttttgcattcagaaacttcagaacttcttaggtatcccg
ctctttgatcctcctgccactctagttccactctatgaactgatcacgcagtttgtactc
tccgggaaggatggcacctcatcaacattgaaacacaacatgcggttttatgcttcttta
ccaggccagcagcattgttactttctgaacaaagacgctccaatccatgatggaaggtgt
ctgcagggtgcactgcttcataaaattcctttcaggcacccaggccaggtgcctcagatt
ctagaactcatccgacaccaagtgtcctacaacacactgattggaagctgtgtgaaaagg
actgtgttgaaggaagatttacctggtcgcttgcaatttgaggtgtgcccactgattgat
accagcttcagcctatccttccagcacccggtcaatgactcactcgtctgtgttgtgatg
gatgtgctggactcgaggcaagtgagctgtaagctgtataaaggactatctgatgccctc
atctgtactgatgacttcattgccagagtggtacagcggtgtatgtccatccccgtgacg
atgcgagcaatccgtcgaaaggctgagaccatccaagcagacacaccggccttgcccctc
attgcagagacagttgaggacatgctgaaaaggaatccacccccagcgaccagtcccggc
tacagcacgcaactgggcaacaatccagcaagtggcaccactactcctaccagtaccttt
cccggccccatttccaccatcttcaatttgggaaacatgggtgtgaaggaaaggcatgaa
tcggggcacggggaggattcctttaaggtaaaccagaacccgattctgactagtttgctg
caaattacagggagtgttggttcatccattggttcaagccctacaccacccggccataca
ccaccaccagcatcttccccggcaagtaataccaaaaaccaccccatgctcatgaactta
ctcaaagacaacccaagccaagatttttctacactgtataatagtagccctttggagagg
caaaattcttcatcaagctctccgagaattgatgtggctacaagtagcacgaaacagaaa
aagaagaggacgaggtcgcaaacagataagcccaagcagcaacagactgaggaggacttc
cagagagaactcatctccatggactttgatgctccgaacagtgtctttgatgtaaacctg
gccggagattctttggacactcctcatattaccccagccccaagccaatgtaacacacca
cctactacatacccttcaacggtggtgcatactcagcagtccagtatgcagagaatggtg
cgcctacctagtacagacagcattggagctgacgtcacagagattctatccgatattgca
gaacagacagctaagctggccaccaccggagacaattgccagtccattgggacgccagtc
cgtgattcttcaaactcttctcattctgctgtaaacagtacgtttgacgcggatgttttt
caaggtgaaagtaatgagaacacgtacactgatcctgcggatttaatagcagatgctact
gctactccaaccagtgactcttcaaaccagttttttcctgatggagtggattttttatta
gataatcaaagcggcaacaattttgtgagtggctattttgatgagaacagccagagtgaa
gatatcgatgactcaaagagctttgcttcacatccacttgcctcaataaatgtgcagaca
atgagtggtgacactggagaccgctctaaagggagcagccatacagacatggtggatttc
agtatgtttgcgagtggcagcaagtctttaggaccatctgatgtggtggaacatagtggg
aatcagagtcctttgttgagcacagttgaagtcggaaaaatggacaaatctcaaaaacag
cgatgtggtaaggaaggaaatggcagcagtagtagcaatttatcaggaataggcattgat
ggaaagcctgggaagcgcaccaggacaccatcgaatgaaggcaaaagcaaagaaaaacct
ccaaaacgtaagaaaactgactcggaaagtaagtccccatctcatagtgtgtcaagccgt
cctttcactccaccagctagtaccaccggctccaaatctcctgggagttctggccgctca
cagacgccacctagtggggctacacctccaattccaaaaatcacaattcagattcgcaaa
gagatggttggcaaatcgtcttcacatagtcagtttgggtcaggtccttcatccagcagt
aaaagtcaccactctcattcatccaattcctcctcctccagcaaagtgaaaagcaacaaa
tccgaaggctcttccagttccaaaatgagcagcagcctttattcaggtcaaagcagtacc
agttcgagccagtccaagagttcttcgcagtctatgggaaaacccagctcttctccagtc
accaaacatgggttgaccagtagtagcagcttgagttccagcaatagtagtagcaacaaa
atgaaacctcaagttaagtcatcatcttccctggttaatccatctggaggaaaacccaat
gtgtctccctcccactcaagaccttcaggcaactcggacaaactttcatcaccattgaag
cccattccagggactccaccaacaaaagctaaatctccagttagctctggctcaggaggt
tctcatatgtcggggtctagttccagttcaagcatgaaacagtcctccggtatggcttcc
tccagttctttgagccagaagcctccaacctccacctcttcttcctcctcgtcctctgct
tcctcaatgtcttcatctcaaaatgctcatggacatttaatcaagggaaaatctccaagt
cgaaccaagaagccatccttgactgcagtgattgacaaattgaaacatggtgtgggtggt
gtaggcggttcaggtgcagaagactgtccagatggtcaaatggctgcagcaacaatgccc
tctactcatagcttgccatccaagcacaatatgtcccctgcagattatcagggaaagcga
gagaaaagcgacaaagaaggaaaatccaaggtctctgtctcaggcagctcaggtgacagt
ggaaagaaatcttccgactccaagaatggtggtggaactggtgtggcaaaaattatcatt
agcaaacatgatggtggttcccccagcatcaaggccaaagtaaccttgcagaagccaagt
gacggtagtggtgatggtttgagacctcagataactggcgcgaaaaactatggctcacct
ttgttcagtggttcaacaccaaaacacgaacggtgttcaccaagttacagcaagtctcct
gcctacacccctcaaggtggagatagtggcagcgaatcggggtcatcgtttgctgagaaa
tcccaccagaacagtccgagctcagatgacgatatccggccactccccgagtacagctta
gaaaagcataaaaaacacaaaaaggagaagaagaaagggaaggacaaggatcgggacaga
gatcgggaccgtgacagagacagggagaagaaaaaatctcactccagcatcaaaccagaa
agttggtcaaagtctcctatttcaactgaccaatccttatctatggcagggaacacatcc
ctgaactccgaacggtcatctcgccccagcccagcatttttaattggcgaagatgatgac
ctgatgaatgtggctctgattggtaactga
DBGET
integrated database retrieval system
