Scyliorhinus canicula (smaller spotted catshark): 119953888
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Entry
119953888 CDS
T11175
Name
(RefSeq) junction plakoglobin-like isoform X1
KO
K10056
junction plakoglobin
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Pathway
scau04382
Cornified envelope formation
scau04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
119953888
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
119953888
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
scau04147
]
119953888
Exosome [BR:
scau04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
119953888
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Arm
ARM_ARMC5
Cnd1
ELMO_ARM
Adaptin_N
HEAT_2
ZER1-like_2nd
Arm_2
ARMC9_ARM
Atx10homo_assoc
IL4
Mo25
Motif
Other DBs
NCBI-GeneID:
119953888
NCBI-ProteinID:
XP_038634444
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Position
19:complement(3013777..3085459)
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AA seq
732 aa
AA seq
DB search
MESYDSEVVSKVAQWQNTCIDSGIHSGLNTNAPSLSGKGNPEDDETWKQGGYTVTTTSYT
TQLPDMEEQLASTRGQRVRAAMFPETLESSTRILSTQLDPSQETNVQKLSESSQMLKAAI
VQLINYQDDAELATRAIPELTKLLNDEDQVIVSKATMIVNQLSKKDASCRALEQSPQMVA
AVVRTMQNTSDLETARHAAGILHNFSHHRDGMLAIFKSGGIPALVRMLSSPVESILFYAI
TTLHNLLLHQEGAKMAVRLADGLQKMVPLLKKNNVKFLAITTDCLQLLAYGNQESKLIIL
ANGGPDALVHIMRTYNYEKLLWTTSRVLKVLSVCPSNKPAIVEAGGMQALGSHLGSSSPR
LVQNCLWTLRNLSDAATKQEGLDNLLNTLVHLLPSDDINVLTCATGILSNLTCNNARNKM
VVCQVEGIEALVHTVLRAGEKEDITEPAVCALRHLTSRHQEAEIAQNKVRANYGMPAVVK
LLNQPYHWPLIKATVGLVRNLALCPTNHAPLRDNGVIPRLVQLLVKAHHETQRQASGGGQ
QQYMDGVRMDEIVEGCTGALHILARDHVNRSEMTQLNTIPLFVQLLYSPVENIQRVAAGV
LCELAQDRHAAEIIDQEGATAPLTEMLHSMNEGIATYAAAVLFRISEDKPQDYRKRLSIE
LTSTLFRNDPEAWDAAERLMAVDAFHDVLLPPGDPNMPFVNSEPGMGMNRELMPDEIYRM
ERLMQEENGYQC
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atggagagttacgattcggaggtcgtcagcaaggtagcgcagtggcagaacacctgcata
gattctggcattcactctggcttgaataccaatgctccctcgctaagtggcaagggcaac
cctgaagatgatgaaacgtggaagcagggaggctatacagtcacaaccaccagctacacc
acccaattaccagatatggaagaacaactggcctctacccgtgggcaacgtgtgcgtgct
gccatgttcccagaaaccctggagagtagcacccgtatcctgtccacccagctagatccc
agtcaggagactaatgttcagaaactgtcggaatcttcccagatgctgaaagccgccatt
gtccagctcatcaattatcaagatgatgcagagcttgcaacacgcgccattcctgaactc
accaaactactcaacgatgaggatcaggttatagtcagcaaggcgaccatgatagttaac
cagctgtcgaagaaagatgcgtcttgccgggccttggagcagtcaccccagatggttgcg
gcagttgtccgcaccatgcagaataccagtgacctggaaaccgcgcggcacgcagctggc
atcttacacaacttttctcaccaccgagatggcatgcttgccatcttcaaatcgggtgga
atccctgcattggtcaggatgttgagctctccagtcgagtccatcttattttatgccatt
actaccctccacaatctgctcctgcatcaggaaggggcaaaaatggcggtccgtttggct
gatgggctccagaagatggttcctcttttgaaaaagaacaacgtgaagttcctcgccatc
accacagattgcctacagctgctagcttatgggaatcaggagagcaagctgattattctg
gccaatggaggcccagatgcccttgttcatatcatgaggacctacaattacgagaagtta
ctctggaccacaagccgtgtgctgaaagttctgtctgtctgtcccagtaataagcctgca
atcgtggaagccggtgggatgcaggcactgggctcgcacctgggcagctccagccccagg
ctggttcagaactgcttgtggaccctgagaaatctctctgatgcagcaacaaaacaggag
gggttagataaccttctcaacacactggtccaccttctgccttcagatgacattaatgtg
ttgacttgcgccactggcatcctctccaatctcacctgcaacaatgcaaggaacaagatg
gtggtgtgccaggtggaaggcatcgaggccctggtccacacagtactgagagcgggcgag
aaggaggacatcactgagccagcagtctgtgctcttcggcacctcaccagtagacaccaa
gaggctgagattgcccaaaacaaagtgcgcgctaattacggcatgcctgctgtggtcaaa
cttctcaatcagccctaccattggccactgatcaaggccactgttggacttgtccgcaac
ttggcactgtgcccaactaatcacgctcccctccgggacaatggtgtaattccccgactt
gtccagctcctagtgaaagctcaccatgaaacacagcgacaagcatctggaggtggacag
cagcaatacatggatggagtacgaatggatgagattgtggaaggttgcacgggagcattg
cacattcttgcccgggatcatgtcaatcggagtgaaatgactcaactcaacacaatccca
ctgtttgtccagctcctctactctcctgttgaaaacatccagcgtgtcgcagctggggtc
ctgtgtgaactggcacaagatcggcatgcagcagagataatagaccaagagggggccaca
gcgcccctcacagagatgctgcactccatgaacgagggtattgctacctatgctgctgca
gtgctgttccggatatccgaagacaagccccaggattaccggaagcgactgtccattgaa
ttgactagcaccctctttagaaatgacccagaggcctgggatgcggctgagcgactgatg
gctgtagatgcttttcatgatgtacttctcccacctggtgatcccaacatgccttttgta
aactcggaacctgggatgggtatgaaccgtgaattgatgcccgatgaaatataccgtatg
gaaagactaatgcaagaagagaacgggtatcaatgttag
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