Scyliorhinus canicula (smaller spotted catshark): 119953903
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Entry
119953903 CDS
T11175
Symbol
prdm10
Name
(RefSeq) PR domain zinc finger protein 10 isoform X1
KO
K24643
PR domain zinc finger protein 10 [EC:2.1.1.-]
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
scau03000
]
119953903 (prdm10)
Transcription factors [BR:
scau03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
119953903 (prdm10)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRDM2_PR
zf-C2H2
zf-C2H2_4
zf-H2C2_2
zf-C2H2_jaz
zf-met
SET
zf-C2H2_2
Zn_ribbon_PRDM4
Zf-C2H2_ZNF451
zf-C2H2_6
zf-Di19
Adeno_PX
Motif
Other DBs
NCBI-GeneID:
119953903
NCBI-ProteinID:
XP_038634484
LinkDB
All DBs
Position
19:57737534..58054644
Genome browser
AA seq
1160 aa
AA seq
DB search
MEPKTEEPPVGWGAPSEQDQPPAQVHFVPESNAVAQIVYTDEQDRPSQQVVYTADGTSYT
SVDGAEHTLVYIHQTDGAQAVFTDQSQVAYIQQDATTQQVTVLLPASQNVTGTNLTVLGS
VTEAQQPMTENNSQALLPVSNNGIPQITGASDSVQQIPETMDTAEQDLDSEEDEDDEEDE
DDVDSSDIDDWEPGPPRPFNPCDLWCEDCNKAHPSTCLKHGPLHCIPNRPVLSRARASLP
LILYINRFAGGIFSKRRIPKRTQFGPVEGPLVRQSELTDDYIHLKISMGVGWEDCKDEDK
PGDLWFDLSDENFCNWMMFVRQAQNHLEQNLVVYQYGKNLYFTTIKHIEPKQELKVWYAA
SYADFVEQKTHDISEEERKVLRDQEKNWPCYECNRRFTSSEQLQQHLNMHDEKLDYFSRS
KCRGRGRGRRRFGPGRRPGRPPKFNRQETITEQSEVLQFAMKHHFEDADEPVANGMDQEE
DSAVVSEQPENYSSIANNTTTSPGAEVRRNKRIRLDFQNAALHHLFIRKTYRPFKCLHCG
KAFREKEKLDQHLHFHGRDGNYPLTCDICNKGFINSSALDSHMKFHSDQKTYSCIFCTDS
FDRLDLLKEHVAIHVTNGCFTCPSCKKQFPDFIQIKKHIRSFHSEKIYQCTECDKAFCRP
DKLRLHMLRHSDRKDFLCSTCGKQFKRKDKLKEHMQRMHNPEREAKNAGRIHKSKPFKPK
IPSTDYESFMFKCRACMMGFRRRGMLVNHLSKRHPDIRIDDVPELTLPIIKPNRDYYCQY
CDKVYKSASKRKAHILKNHPGAELPPSIRKLRPAAPGEPDPMLSTHTQLKGTIATLPVCC
PHCCKQYSSKAKMVQHIRKKHTDVLQENPNALQTLPAQTPIVATVIGAAPNVVNTDGSTG
DTIVATDLLTQAMSELSQTLTADYRPAQGDYQRVQYIPVSQHLQSVQGQQPQHIQLQVVQ
VAQASSPQQNQHSTVDVSQLHDPHAFAQHSVQVQHVQVADQSSAMAPTGSQTGGGQPLSP
SSQQQQELSPSQVQGGTSTQNQVLQHQPTTAVQHTYLPSTWGTYRNYSSEIQMMTIPQTQ
YVIAEAPVATVNSGQVKAVTQTHYVISEGQPELDMKQDSAVRLGVPQTQTDTSLQQQNAQ
FIITSTASGNGTTEVPITKP
NT seq
3483 nt
NT seq
+upstream
nt +downstream
nt
atggagcctaagacagaggaacctcctgtcggatggggtgcaccttccgagcaagatcag
ccacctgcccaggtacattttgttccagagagcaatgcagttgctcagattgtttacacg
gatgaacaggatcgaccgtcacagcaagtggtttacacagcagatggaacctcctacaca
tctgtggatggggcggaacataccctggtgtacattcaccaaactgatggagcgcaggcc
gttttcacagatcagtcccaggtagcgtacatccaacaggatgcaaccacccagcaggta
acagttcttctgcctgccagccagaatgtgactggcaccaatctgacagtccttggcagt
gtgacagaagcacaacagccaatgacggagaacaattctcaggctcttttgcctgtttca
aataacggaatacctcaaataacaggagccagcgactctgtgcagcaaattccagaaaca
atggacacggctgaacaagacctcgactctgaagaggatgaggatgatgaagaggatgag
gatgatgtagactcatctgatatcgatgattgggaaccaggtccccccagaccctttaat
ccatgtgatttatggtgtgaagattgtaataaagctcatccatcgacatgtctcaaacat
ggtcccctgcactgcattcccaatcggcccgtcctgagccgggcccgggccagtctgccc
cttattctctacatcaaccgatttgctggtggaatcttctccaagaggcgcattccaaag
cgcacgcagtttggccctgtagagggtccactagttagacagtctgagctcacggatgac
tacattcacttaaagatttctatgggagtaggatgggaggattgtaaggatgaggataaa
ccaggggatctgtggtttgatctttctgatgagaacttttgcaactggatgatgtttgta
cggcaagcacagaaccacttggaacagaaccttgtggtgtaccagtatggcaagaacctc
tatttcaccactatcaaacatatcgagccgaaacaggaactcaaggtgtggtatgcagca
tcatacgcagattttgtggagcagaagacccatgatatttccgaagaggaacggaaagtg
ttaagagaccaggaaaaaaactggccctgctatgagtgtaaccgtcgcttcaccagctct
gagcagctccagcaacatctcaacatgcatgatgagaagctggattacttcagcaggtcc
aagtgcagaggtcgcggccgaggtaggaggcggtttggtccagggagacgaccaggccgg
ccgccaaagttcaaccgacaagagacgattacagaacagagtgaggtgttgcagttcgct
atgaagcatcacttcgaagacgcggacgaacctgtggccaatggaatggatcaagaggaa
gactctgccgttgtctctgagcagccagaaaattattccagtattgctaataacacaact
acaagtcccggagcggaagtacggcgcaataaacggatacggttggatttccagaatgcg
gcacttcatcatctctttatacgtaaaacatatcgaccgtttaaatgccttcactgtgga
aaagcattccgggagaaggagaagttggatcagcacctgcacttccatgggcgggatggc
aactacccactgacctgtgacatctgtaacaaaggcttcataaacagttcagcacttgat
tcacacatgaaattccactctgatcagaaaacgtactcctgtattttctgcacagattct
ttcgatagacttgacctgctcaaagaacatgtcgcaattcatgtcactaatggctgtttc
acttgcccttcttgtaaaaaacaattcccagacttcattcagataaagaagcatattcgc
agcttccattctgagaagatttatcaatgtacagaatgcgacaaggccttctgccgacca
gacaagctccgactacacatgctgagacactctgaccgcaaagatttcctctgctccact
tgtggcaagcagttcaaaaggaaggataagttgaaagagcacatgcagcggatgcacaac
cctgaacgtgaagccaagaatgccggtcgcatccacaagtccaaacctttcaagcctaag
atcccttccactgactatgagagcttcatgtttaagtgccgagcctgtatgatgggcttt
cgcaggcgaggaatgctggtgaatcatttgtcaaaaagacaccctgatatcaggatagac
gatgttccagagttaacgctgcccatcattaaacctaacagagattattattgccagtac
tgtgacaaggtgtacaagagtgccagtaagcgcaaagcccatatcctgaagaaccaccca
ggggctgagcttcctccgagtatccgcaaattgcgacctgcagctccaggggagcctgat
ccgatgctgagcacacatacacagttgaaaggtaccatcgccacgctccctgtctgctgt
ccacactgctgtaaacagtacagcagcaaggcaaaaatggtgcaacatatccgcaagaaa
catactgatgttctgcaagagaatccgaatgcactgcagacacttcctgcacaaacgcca
attgtggccactgttatcggtgcagcaccaaatgttgtgaacacagatggctctactgga
gacacaattgtggctactgatctgctgactcaggcaatgagcgagttgtctcagacgctg
acggccgattaccgcccagcccaaggagattatcagcgcgtgcagtacattcctgtctct
cagcaccttcaatccgttcagggacagcagcctcagcacatccaactccaggtggtacag
gtggcacaggcatcctccccacagcagaatcaacattccaccgtggatgtcagccagctg
cacgatcctcatgcttttgcacagcactccgttcaggtccagcatgtacaagtagcagat
cagtccagtgccatggcccccactggctcccagactggaggaggtcagccactgagccct
tcatcacagcagcaacaagaactcagtccttctcaggtacagggtggaacatcaacgcaa
aatcaggtcttacagcatcagccaacaactgctgtacagcatacataccttcccagcacc
tgggggacctatcgcaactactcctctgaaattcagatgatgaccattcctcagactcag
tatgttatcgcagaggctcctgtagccacagtaaacagcggccaggtgaaagcagtgacg
cagactcattatgtgatatcagaaggacagcctgagctggacatgaagcaggattctgca
gtccgacttggcgtgccccagacacagacagacacttcgctacaacagcaaaatgcacag
ttcatcattacctcgacagctagtgggaatggaactactgaggtgccaatcacaaaaccc
tag
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integrated database retrieval system
