Scyliorhinus canicula (smaller spotted catshark): 119954005
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Entry
119954005 CDS
T11175
Name
(RefSeq) interferon beta-like
KO
K05414
interferon alpha
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Pathway
scau04060
Cytokine-cytokine receptor interaction
scau04217
Necroptosis
scau04620
Toll-like receptor signaling pathway
scau04621
NOD-like receptor signaling pathway
scau04622
RIG-I-like receptor signaling pathway
scau04623
Cytosolic DNA-sensing pathway
scau05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
119954005
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
119954005
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
119954005
04621 NOD-like receptor signaling pathway
119954005
04622 RIG-I-like receptor signaling pathway
119954005
04623 Cytosolic DNA-sensing pathway
119954005
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
119954005
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
scau04052
]
119954005
Cytokines and neuropeptides [BR:
scau04052
]
Cytokines
Interferons
119954005
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Interferon
Exo84_C
Motif
Other DBs
NCBI-GeneID:
119954005
NCBI-ProteinID:
XP_038634711
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Position
19:40502924..40504743
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AA seq
184 aa
AA seq
DB search
MNFPSVWGVWTLLILLPGVLSQDCLRLQLQEVFNKDAQNSLKIMGGPFPLECKTTRESLR
TKSLNLHHLVKRLQTQDRIQIVHQTLRHISKIYSMNLASVTWARDKVEHFRLLLDRQLSQ
LEECVRKPGSSLRRNSAIHNYFRKLEKFLNQEGFSDCAWEIIRTETRARLQQLLFITAQI
SRRN
NT seq
555 nt
NT seq
+upstream
nt +downstream
nt
atgaattttccaagtgtttggggcgtgtggactttgttaatcttgttacccggggtcttg
agccaggactgcctgaggctgcagttacaggaagtcttcaacaaggatgctcaaaattcc
ctgaagatcatgggaggaccctttccattggagtgcaaaacaacgagagaatcgctgaga
accaaatctctgaacctgcaccatctcgtcaagaggttacagacacaggacaggatccag
attgtccatcagaccctacgtcacatcagcaagatctacagcatgaacctggcctcagtc
acctgggcccgggacaaggtggaacatttccggcttctcctggaccgacagctcagtcag
ctggaagaatgtgtcaggaaaccgggatccagtctgaggagaaactccgccattcacaat
tactttcggaaattggaaaagtttctcaatcaggagggattcagtgactgtgcctgggaa
ataatccgcactgagaccagggcccgattacaacagctccttttcataacggcacaaatc
agcagaaggaattaa
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