Scyliorhinus canicula (smaller spotted catshark): 119954044
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Entry
119954044 CDS
T11175
Name
(RefSeq) glutamate receptor ionotropic, kainate 4
KO
K05204
glutamate receptor, ionotropic kainate 4
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Pathway
scau04080
Neuroactive ligand-receptor interaction
scau04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
119954044
04082 Neuroactive ligand signaling
119954044
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
scau04040
]
119954044
Ion channels [BR:
scau04040
]
Ligand-gated channels
Glutamate (ionotropic)
119954044
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GFIT
Motif
Pfam:
ANF_receptor
Lig_chan-Glu_bd
Lig_chan
SBP_bac_3
DUF1623
Motif
Other DBs
NCBI-GeneID:
119954044
NCBI-ProteinID:
XP_038634744
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Position
19:complement(106463432..106692508)
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AA seq
864 aa
AA seq
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MLHFLMLLVLSLRKSSAFPHSLRLAAILDDPMECSRGERLAISLAKNHINHMVEQSEKAR
LDVDVFELLQDSEYETAETTCQILPKGVVAILGPSSSPASASIISHICGEKEVPHVKVAA
EEIPKLQNLRFTTLNLHPSNMDISLAIASILKFFNRTMACLICAKAECLLNLEKLLRQFL
ISKDTLSVRMLDQSQDSTPLLKEIRDDKIATIIIDGSTSVSQSILHQAVLLGMTSADYNY
IFTCLEFPLLYFDGLNEDHVNILGFSITNLDHPHYNDFVYSLNQSWQENCAHVSYPGVAL
SSALLFDAVYVVITAVHELNRSQEIAVKSLSCASAQIWQHGTSLMNYLRMVELEGLTGHV
EFTSKGQRTNYVLKIMQRNKDRLKQVGIWHSENGLVMDRRFYLLNASESLFNKTLIVTTI
LENPYVMLKPEYQELEGNQRYEGFCVDMLKELSQILRFHYKIQLVADGVYGVAEANGTWT
GMVGELISRKADLAVAGLTITAEREKVIDFSKPFMTLGISILYQAQMGRKPGYFSFLDPF
SPGVWLFMVLAYLAVSCVLFLVARLSPYEWYNPQPCLRGKCNVLVNQYSLGNSLWFPVGG
FMQQGSEIMPRALSTRCVSGVWWAFTLIIISSYTANLAAFLTVQRMDVPIESVDDLAEQT
NIEYGTIQRGSSMTFFQNSRYQTYQHMWNYMHSKQPSVFVKSTEEGISRVLNSNYAFLLE
STMNEYHRQRNCNLTQIGGLLDTKGYGIGLPLASLFRNEFDLAILQLQENNQLEVLKRKW
WDGGKCPKEGELRAKGLSCPVFLVELRALAKTKNKGKSFPQESVLLLLSSNVIVLSKHNK
ETVGTEPTFTTNTFVQQEYNWQIA
NT seq
2595 nt
NT seq
+upstream
nt +downstream
nt
atgctgcacttcttaatgttgctggtgttgtctttaaggaaaagttcagcattcccacat
tcactccggctggcggcaattctagacgatccaatggagtgcagtagaggtgaaagactt
gccattagtcttgcgaaaaaccatatcaaccacatggtggaacaatcggaaaaggcaagg
ctagacgttgacgtgtttgagcttctacaggacagtgaatatgaaacagcagaaactact
tgtcagattctgccaaagggggttgtggcaatcttgggtccatcttcaagtccagcatct
gcctctattatcagccacatctgcggtgagaaggaggtgcctcatgttaaagtagctgct
gaagagattcctaaattacagaatttgaggttcactacattaaatctgcacccaagtaac
atggacatcagtttggctattgctagcatcttgaagttcttcaacaggacaatggcctgc
ctgatctgtgccaaagctgaatgccttttgaatttggagaagcttttacggcagtttctc
atttccaaggacaccttgtcagtccgaatgttggatcaaagtcaggactcaacacccctc
ctgaaggaaattcgagatgacaaaattgcaacaattattattgatggcagcacttcagtg
tcacaatccatccttcaccaggccgtgctgttaggaatgacatctgctgactataactac
atcttcacatgtctggaatttcctcttctctattttgatgggctaaacgaagaccatgtg
aatatattggggttttccatcactaacctggatcatccacattataatgactttgtctac
agtctgaaccagtcctggcaggaaaactgtgcgcatgtatcttacccgggagtagcgctc
tcctctgcactcttgtttgatgctgtctatgtcgtcatcaccgctgtccatgaacttaac
cgcagccaggaaattgctgtcaaatccttgtcctgtgcctctgcacagatttggcaacat
ggaaccagccttatgaactatctaagaatggttgaattagaaggtctgaccggtcatgtc
gaattcaccagcaagggtcagagaactaattatgttttgaagattatgcaacgcaataaa
gatcggctgaaacaggttgggatctggcactcagagaatgggctagtgatggacagaagg
ttttatttgttaaatgcttcagagagtttgttcaataagactcttattgtgacaacaatc
ttggaaaatccttacgtgatgctaaaaccagagtaccaggagctcgagggaaatcagcgt
tacgaggggttctgtgtggatatgctgaaggaactgtcacaaatcctcaggtttcattac
aaaatccagctggtagctgatggcgtgtacggggtggcagaggccaatggcacatggact
gggatggttggtgagcttatttcaaggaaagctgacctcgctgtcgcaggcttaaccatc
acagcagaacgtgagaaggtcatcgatttctccaaaccatttatgactttaggaattagt
atcttgtaccaagctcagatgggtaggaaacctggttatttttccttcctggaccctttc
tctcctggtgtttggctcttcatggttcttgcctatcttgcagtcagttgtgttctcttc
cttgtagccaggttgtctccttatgagtggtataaccctcaaccctgcttgcgaggaaaa
tgtaacgtgttggtcaatcagtattcactcggaaacagcctatggttcccagtaggtggc
ttcatgcagcaaggatccgagatcatgcctcgagcactctccacacgctgtgttagtgga
gtatggtgggcattcacactgattatcatatcatcttacacagccaatctggctgccttc
ctcactgtgcaaagaatggatgtgccaatagaatcagttgatgatcttgctgagcaaaca
aacattgaatatgggacaattcaaagagggtcaagcatgacattcttccagaattctcga
taccagacctaccagcatatgtggaactatatgcattccaaacagccaagtgtctttgta
aaaagcacagaagaaggaatttctcgagttctgaactccaactatgcctttttattggaa
tctaccatgaatgagtaccaccggcaacgtaattgcaaccttacacagatcggaggtctc
ctggataccaaaggatacggtatagggctaccacttgcttcactttttcgtaatgaattt
gacttggccattctccaacttcaggaaaataaccaactggaagtgttaaagcggaagtgg
tgggacggaggaaagtgcccgaaggaaggagagctcagggcaaaaggactgtcctgtcca
gtctttcttgtagagttaagagctctggcaaaaactaagaacaaaggaaagtccttccct
caggaaagtgtcctcctgttgctaagcagcaacgtcatagtcctttctaagcacaataaa
gagacagttggaacggaaccaactttcacaacaaacacctttgtccagcaagaatataac
tggcagattgcatga
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