Scyliorhinus canicula (smaller spotted catshark): 119954056
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Entry
119954056 CDS
T11175
Symbol
hdac5
Name
(RefSeq) histone deacetylase 5 isoform X1
KO
K11406
histone deacetylase 4/5 [EC:
3.5.1.98
]
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Pathway
scau04371
Apelin signaling pathway
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
119954056 (hdac5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
scau03036
]
119954056 (hdac5)
Enzymes [BR:
scau01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
119954056 (hdac5)
Chromosome and associated proteins [BR:
scau03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
119954056 (hdac5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
HDAC4_Gln
Motif
Other DBs
NCBI-GeneID:
119954056
NCBI-ProteinID:
XP_038634766
LinkDB
All DBs
Position
19:complement(25114757..25319264)
Genome browser
AA seq
949 aa
AA seq
DB search
MLLKPKVPGLKKMLQTIYETESCFSSDGVSGREQPLELLPQSRMHTMPTSAVEVKSSLPV
TMQTATPVDLRTEPRIPIPTVDPLLREQQLQHELLMLKQQQQIQKQLLFAEFQKQHEHLT
RQHEVQIQEHLKQQQEILAVKRQQELEQQRKLEQQRHEELEKQRLEQQLLMLRNKEKGKE
SAIASTEVKLKLQEFLLSKTASKDSVTSGLNHSLPQHPKSWGAHHASLDQSSPPQSTTPP
TYKVPLLGSYDGKDDFPLRKTASEPNLKVRSRLKQKVAERRSSPLLRRKDGTIISTFKKR
AIEITVSSVCNSAPGSGPSSPNSSNNIPAENGTTGSVPNIHAEHMHPHHKAVNTDGSASQ
LSLYTSPSLPNISLGLPATVAASNAQINASQKMSAQQEAERQAIQSLRQGGALTGKFVST
TSIPTGLSTTAIEGEANAHSHPSLLQHVLLLEQARQQNALIAVPLHAQSPLVTGERVSTN
LRTVNKLPRHRPLSRTQSAPLPQSPQALQQLVMQQQHQQFLEKQKQYQQQIQLKMLSKSS
ESPRQPPSHPEETEEELCEQQDMQEDQAPPRNNSINTGGSEATNESLEQDAMQVKDEPPD
SEDEDQLEDQKEAEEQLLHFNQQQFLDQQRMQQLHVYQASVAMGSMSVTDRHQPLCRAQS
SPATANLKNPGTEKPIKHLFTTGLVYDTFMLKHQCTCGNTNNHPEHAGRIQSVWSRLQET
GLLNKCERIRGRKATLDEIQTVHSEHHTLLYGTSPLNRQKLDSKKLLGPITQKMYALLPC
GGLGVDSDTVWNEMHSSSAVRMAVGCVVELSFKVAAGELKNGFAVVRPPGHHAEESTAMG
FCFFNSVAISAKLLRQKLNVEKILIVDWDIHHGNGTQQAFYSDPNVLYISLHRYDDGNFF
PGSGAPDEVGTGPGVGFNVNIAWTGGVDPPNGDVEYLTAFRTVVMPIAK
NT seq
2850 nt
NT seq
+upstream
nt +downstream
nt
atgttactgaagcccaaagtgcctggactaaaaaagatgttacagactatttatgaaact
gaatcgtgtttctcctcagatggtgtatctggacgagagcagcccctagaattgttgcca
caaagtcggatgcacactatgccaacctcagcagttgaagttaaatcctccctgcctgtg
actatgcagactgctaccccagttgacctgaggacagagcccagaatcccaatcccaact
gtggaccctcttcttcgcgagcagcagttacagcatgaactgctgatgctcaagcagcag
caacagatccagaagcagctactatttgctgagttccagaaacagcatgaacacctgaca
agacagcatgaggttcagattcaggaacacctaaagcaacaacaggagatcctagcagtg
aagcgtcagcaagaattggaacaacaacgtaagcttgaacagcaacggcatgaagagttg
gagaagcagagactggagcagcaattgcttatgcttcgaaacaaagagaaaggcaaggaa
agtgcaatagctagtacagaggtcaaattaaaacttcaggagttcctactaagtaaaact
gcctcgaaggattctgtgaccagtggattgaatcattccctccctcagcaccccaaaagc
tggggagcccaccatgcatcactggaccagagctccccaccccagagtacaactcctccc
acctacaaagtcccactgctgggatcatatgatggaaaagatgattttccactacgaaaa
actgcttccgaacccaatttgaaggtacgttccagattaaaacagaaggtagctgagagg
agaagcagcccgttattgaggaggaaagatggcacaataattagcacattcaagaagaga
gctatagaaatcacagtttcctcagtctgtaacagtgctcctgggtctggccctagctct
ccgaacagttcaaacaatattcctgcagagaacggaacaaccggttctgtacccaatatt
catgctgagcatatgcacccacatcacaaagcagtgaacactgatgggtcagcaagtcag
ctcagcctctacacgtccccctcactgcctaacatttccctggggctcccagctacagtc
gcagcatccaatgcacagatcaatgcatcgcaaaagatgtccgcccaacaagaagcagaa
aggcaagctattcagtctttgcgacagggtggtgccttaacaggaaagttcgtgagtaca
acctcaataccaactggcttgtccacaacagcaattgaaggcgaagctaacgctcacagc
cacccctcccttcttcagcatgtgctgctactggaacaagctcgacagcagaatgctttg
atagctgtgccactccatgcgcaatcaccattggtaacaggtgaacgagtgtccaccaat
cttcgaacagtgaacaagttgcctcggcatcgcccattaagtcggacccaatcagctcct
ttaccccagagtccacaagctttacagcagctggtaatgcagcaacagcatcagcagttt
ttggagaaacagaaacagtaccaacaacaaattcaacttaagatgctttccaagtcaagt
gaatcacctcggcagcctccaagtcaccccgaggagacagaggaagaattgtgtgagcaa
caggacatgcaggaggatcaggcacctccaagaaacaacagtatcaataccggaggaagt
gaagcaacaaacgaaagtttggaacaggatgcaatgcaggtgaaggatgagccaccagat
agtgaagatgaagaccagttagaagatcagaaagaagcagaagaacaacttctgcatttt
aatcagcaacaattcttggaccagcaacgcatgcaacagcttcatgtgtatcaggcttct
gtagctatgggaagtatgtctgtgacagacaggcatcagccactctgcagggcccagtcc
tccccagcaaccgcaaacttaaaaaatcctggcactgagaaacctatcaagcaccttttc
actactggtttagtctatgacacttttatgctgaaacaccagtgcacttgtgggaacacg
aacaaccatccagagcatgcagggagaatacagagtgtctggtctaggcttcaggaaaca
gggttactcaacaagtgtgagcgaatccggggtagaaaagcgactttggatgaaattcaa
acagtgcattcagaacaccacacattgttatatggcaccagccctctgaacagacagaag
ctggacagtaagaagttgctaggtcctattacacagaagatgtatgcactgctaccctgt
ggtggacttggggtggacagtgacactgtgtggaatgaaatgcattcctctagtgctgtt
cgcatggctgttggctgcgtcgttgaactctcattcaaggtggctgcaggggagctcaag
aatggttttgctgttgtcagaccaccaggacatcatgcagaagaatccactgcaatggga
ttttgctttttcaactcggtggcaatttctgccaaactacttaggcaaaaacttaacgtt
gaaaaaattttaattgtggattgggatattcaccatggaaatggtacacagcaggccttt
tacagtgaccctaatgtgttgtacatttctcttcatcggtatgatgatggaaatttcttt
cctggcagcggtgccccagatgaagttgggacaggacccggagtaggattcaatgtcaat
attgcttggacaggtggtgtggatccccctaatggagatgtcgagtacttgacagctttc
aggactgtcgtgatgcccattgccaaatga
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