Scyliorhinus canicula (smaller spotted catshark): 119954074
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Entry
119954074 CDS
T11175
Symbol
aarsd1
Name
(RefSeq) alanyl-tRNA editing protein Aarsd1 isoform X1
KO
K07050
misacylated tRNA(Ala) deacylase [EC:3.1.1.-]
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
scau03016
]
119954074 (aarsd1)
Transfer RNA biogenesis [BR:
scau03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Trans-editing factors
119954074 (aarsd1)
Prokaryotic type
119954074 (aarsd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA_SAD
tRNA-synt_2c
Exo70_N
Motif
Other DBs
NCBI-GeneID:
119954074
NCBI-ProteinID:
XP_038634849
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Position
19:complement(19020438..19057560)
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AA seq
412 aa
AA seq
DB search
MAFQCQKHSYMKEFETLVVSCTPAELKIAVNGKKETLKGFNVILEDTLLFPEGGGQPDDR
GFMNDIPVLRVTRRGPKAIHFVQSTLEPLSIVQLKIDWERRFDHMQQHSGQHLITAIADL
MFGFKTTSWELGRQRSFIELDTPSVTGEQVEALELAVNEKIREHIPVNVRVVTVDDPEVE
KVRSRGLPDDHAGPVRIVDIVGIDANMCCGTHVSNLSHLQAIKILGTDKGKKNKTNLIFL
AGNRVLKYAERSYTVERALTTLLKNGPEEHVEAVDKLQKSVKLLQKNNLSLLRDLALLTA
NSFKSDPNKGKLLVLHRKDGDNEFMNIIANEVSAEVVLLFLTVGDEKGAGLFLLAGQVDA
VEALGSKVSQILDGKGAGKRGRYQGKANKMSKRTEVEALLQQYVSSLDTKEE
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atggctttccagtgtcagaaacacagctacatgaaggagtttgagaccttggtggtgtcg
tgcactccagcagagttgaaaatcgctgttaatgggaaaaaggaaactttgaaaggcttt
aatgtgatccttgaggacactttgctgtttccagagggaggtggacagccagacgaccgt
gggttcatgaatgacatccctgtgttacgagtgacacgacgtgggccaaaggctattcac
tttgtgcagtcgaccttggagcctttgtctattgttcagctgaagattgattgggaaaga
cgatttgaccacatgcagcaacattcaggacaacatttaattacagccattgcagatttg
atgtttggtttcaaaacaacctcatgggagctgggccggcagcgtagtttcattgaactg
gacactccttctgtgactggtgagcaggttgaagctctggagttagcagtaaatgaaaaa
atcagggagcacatacctgtcaatgtgcgagttgtaactgtggatgacccagaggtagaa
aaggtgagaagtcggggtttaccagatgatcatgcaggcccagttcgaatagtcgacatt
gttggaatcgatgcaaatatgtgctgtggaacacacgtatcaaatctcagtcacctacag
gccattaaaattttagggacagataaaggaaagaagaacaaaaccaacttgattttcctg
gctggcaatagagtgctgaaatatgcagagagaagttacacagtggaaagggctttaacc
acccttctcaagaatggcccagaggaacacgttgaagctgtggacaagttgcaaaaatct
gtcaaattgctacagaagaacaatctaagcctgcttcgggatttggctctgttaacagca
aacagctttaagagtgatccaaacaagggcaagttattagttttgcatagaaaagatggc
gacaatgaatttatgaacattatagcaaatgaagttagtgctgaggtcgtacttctgttc
ctcacagttggtgatgaaaaaggagcaggattgttcctgttagcaggtcaagtggatgct
gttgaagcactgggatcaaaggtttctcaaatccttgatggaaaaggtgctggaaaacgg
ggacgttaccagggtaaagcaaacaagatgagcaaacggacagaggtggaggccctcctt
cagcaatacgtcagctcactggacacaaaagaagaatga
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