Scyliorhinus canicula (smaller spotted catshark): 119954109
Help
Entry
119954109 CDS
T11175
Symbol
smfn
Name
(RefSeq) small fragment nuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Pathway
scau03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
119954109 (smfn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
scau03019
]
119954109 (smfn)
03009 Ribosome biogenesis [BR:
scau03009
]
119954109 (smfn)
Messenger RNA biogenesis [BR:
scau03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
119954109 (smfn)
Ribosome biogenesis [BR:
scau03009
]
Eukaryotic type
Pre-60S particles
RNases
119954109 (smfn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
Motif
Other DBs
NCBI-GeneID:
119954109
NCBI-ProteinID:
XP_038634927
LinkDB
All DBs
Position
19:complement(81398290..81406818)
Genome browser
AA seq
278 aa
AA seq
DB search
MVRLRMWGAGLKAAAGAAVGRFRTPCPGRHRPAPLTAPPPACPRPDHSGKSPPSCPRHAG
SLTSIRYLTTMAAQGMAKRMVWVDLEMTGLDIEKDKIIEMACIITDSDLNILAEGPHLIV
NQPNELLDGMSEWCTEHHGKSGLTQAVRDSKISLQQAEYEFLSFIRQHTPPGLCPLAGNS
VHADKKFLDKYMPQFMKHLHYRIIDVSTIKELCRRWYPDEYEDAPKKKASHRALADICES
IKELQFYRMHIFKETKADEKKRKTHLENGDNSKQESSG
NT seq
837 nt
NT seq
+upstream
nt +downstream
nt
atggtgcgcctgcgtatgtggggcgcgggtcttaaagctgctgctggggcggcagtcggt
cgctttcgtaccccctgtcccggccgccatcgccctgcccctctcactgctccaccgccg
gcctgtcccaggcccgaccacagcgggaagtcgccgccgtcgtgtcctcgccacgccgga
tcgctcacctccatccgctatctgactaccatggcagcccagggcatggccaagaggatg
gtttgggtggatctggagatgactggattggacatagaaaaagataaaatcatagagatg
gcttgcattataaccgattcagatttgaatattttagctgagggtccacatctgattgtt
aaccagccaaatgagctactggatggcatgtcagagtggtgtacagaacatcatgggaag
tcaggcctcacacaagcagtgcgggatagcaagatcagcctacagcaagcagaatatgag
tttttgtcctttatacgacaacataccccaccaggtctctgtcctcttgcaggaaattca
gttcacgctgataaaaagtttctggataagtatatgccacaattcatgaagcacctgcat
tacagaataattgatgtcagcaccatcaaagaattatgcagacgttggtatccagatgag
tatgaagatgcaccaaagaagaaagcatcacatcgagcattagctgacatctgtgagagc
atcaaagagctccagttttacaggatgcatatatttaaagaaaccaaagccgatgagaag
aagagaaagactcacctagaaaatggcgacaatagcaagcaagagagctcgggctaa
DBGET
integrated database retrieval system
