Scyliorhinus canicula (smaller spotted catshark): 119954536
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Entry
119954536 CDS
T11175
Name
(RefSeq) glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1-like isoform X1
KO
K00731
glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase [EC:
2.4.1.122
]
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Pathway
scau00512
Mucin type O-glycan biosynthesis
scau00514
Other types of O-glycan biosynthesis
scau01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00512 Mucin type O-glycan biosynthesis
119954536
00514 Other types of O-glycan biosynthesis
119954536
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
scau01003
]
119954536
Enzymes [BR:
scau01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.122 N-acetylgalactosaminide beta-1,3-galactosyltransferase
119954536
Glycosyltransferases [BR:
scau01003
]
Glycan extension
Type 3 chain
119954536
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fringe
Galactosyl_T
Glycoamylase
ZapG-like
Motif
Other DBs
NCBI-GeneID:
119954536
NCBI-ProteinID:
XP_038635770
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Position
19:29376039..29449935
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AA seq
337 aa
AA seq
DB search
MAVPRSVSSFINFIFGIVIGVFICSYFVSKATLHIQQNMQTKQNHRNFHHYSSTLKGITN
CSSRRDQSVADELYKKVRILCWVLTAPKNLDTKAKHVKATWGKRCSILLFMSSESNPNFP
TIGLETKEGRKQLYWKTIKAFHYVHRHHIDEADWFLKADDDTYVVLDNLRLLLSKYNPDE
PLYMGRRFKMFLKQGYMSGGAGYVLSRESVKRYVAAFSDKTCNHTSHVEDRALGKCMEIL
GITAGDSRDNHLRETFLPLTLLSHLIKRHPDSSFWYWKFTYYKATNGPECCSDLAISFHY
VTPEQMHILEYYIYHLHAVGYKYRKSTDFPSPIKTLG
NT seq
1014 nt
NT seq
+upstream
nt +downstream
nt
atggcagttccaaggtctgtgagctcctttatcaactttatctttggaattgtgataggg
gttttcatctgctcctattttgttagcaaggccacattacacatccagcagaacatgcag
actaagcaaaaccatcgcaacttccatcattacagttcgactctgaaaggaataacaaat
tgtagttcaagaagggatcagtctgtggcggatgagttgtacaagaaggtgcgcatcctt
tgttgggtgctgactgcgcccaaaaacctggacacgaaagccaagcatgtcaaagccacc
tggggcaagcggtgtagcatcttgctgttcatgagctcagaaagcaatccgaatttcccc
accattggcctggaaacgaaagagggcagaaaacagctatactggaaaaccattaaagct
ttccattacgtgcacaggcaccacatcgacgaggccgactggtttctgaaggccgacgat
gacacctatgtcgtccttgacaatctccgattgctgctttcgaagtacaaccccgatgag
cctttgtacatgggcagacgctttaaaatgttcctcaaacagggttacatgagcggagga
gctggctatgtcttgagcagagaatctgtgaaaaggtacgtggcagccttcagcgacaag
acctgcaatcatacttcccacgttgaggatcgagcactgggcaaatgcatggaaatactt
gggattacagctggagactccagggataatcacttacgggagacatttttacctcttaca
ctgctgagccatttgataaagcgtcatccagacagcagcttctggtactggaaattcacc
tactacaaagctacaaacggtcctgagtgctgctccgacttggcaatttccttccactac
gtaacccctgagcagatgcacattctggagtattacatttatcaccttcatgctgtgggt
tacaaatacagaaaaagtacagattttccaagcccaatcaaaacactaggatga
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