Scyliorhinus canicula (smaller spotted catshark): 119954562
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Entry
119954562 CDS
T11175
Symbol
tfip11
Name
(RefSeq) tuftelin-interacting protein 11
KO
K13103
tuftelin-interacting protein 11
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
scau03041
]
119954562 (tfip11)
Spliceosome [BR:
scau03041
]
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
119954562 (tfip11)
Other components
Complex C specific factors
119954562 (tfip11)
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Paralog
GFIT
Motif
Pfam:
GCFC
TIP_N
G-patch
G-patch_2
DUF1281
Peptidase_M24_C
Motif
Other DBs
NCBI-GeneID:
119954562
NCBI-ProteinID:
XP_038635846
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Position
1:29574309..29608933
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AA seq
830 aa
AA seq
DB search
MSMSHLYGKDQDDDEVEMERFEISDWDLENEFNPNRVRHRQTKEDAIYGMWAENDSDDER
PSFGGKRSKDYTAPVNFISAGIRRPAAEENEEEKDSDDSEEEKVKRDDFPKEFAPKKLKT
GGFFKSSSKGFTGGHRTNQEIGTWEKHTKGIGQKLLQKMGYVPGRGLGKNAQGIVAPIEA
KMRKGKGAIGAYGSERTEQSLKDFPIVDSDEEADEDFQQEMSQWRKDPAGGKKKPKYTFK
TVEELKAKGATSLGRKMATPQTELSQVKVIDMTGKEQKVYYSYSQMNQKHDIPDDTHSPV
KDAKSEGFSLPELEHNLQLLIEMTEQEIIQNDRQLQYERDMVVNLSHENEKLSEVLAHEE
KIIDKLSSILQIVEDCEKRLLPNCENPLTLEECANIFEMLQEKYFEEYKMFDLAELSIAV
VFPLLKEFFKTWNPLQDNNYGLDVMSQWRKLLERDQLHHGGCDMLSLDPYHRLVWEVWMP
YVRNVVSQWLPRNCAPMVDFLENWMPAVPLWILDNILEQLIFPKLQREVENWNPLTDTVP
IHAWIHPWLPLMQMRLEPLYSPIRNKLSNALQKWHPSDSSAKLILLPWKNVFTPGSWEAF
MLKNIVPKLGMCLSEFVINPHQQHMDTFHWAMDWEDMISPSSLIGMLEKNFFPKWLQVLC
SWLSNSPNYEEVTKWYLGWKSMFSDQVLAHPTIKEKFNEALDIMNRAVASTVGGYMQPGA
RENIAYLTHTERRRDFQYEAMQERREAENMAHRGIGVSSSSIPMNFKDLIQAKAEEHNIV
FMPLMGKRHEGKQLYTFGRIVIYIDRGVVFVQGEKTWVPTSLQSLIDMAK
NT seq
2493 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatgtcacatctatatgggaaagaccaggatgacgatgaggtggagatggagcgg
tttgagatttcagactgggacttggaaaatgagtttaacccaaaccgtgtgcgccaccga
cagacaaaggaggatgcaatctatggcatgtgggctgagaatgactctgatgatgagaga
ccaagctttggggggaaacgttccaaagattacactgctccagttaatttcatcagtgct
ggaatccgtcgacctgcagctgaggaaaatgaggaagagaaggactctgatgattctgaa
gaggagaaagttaagcgagatgattttccaaaagaatttgcaccaaagaaactaaaaact
ggtggctttttcaaatctagttcaaaaggattcacaggaggacatcgaacaaaccaggaa
attggcacctgggaaaaacacaccaaagggattggacagaaactgctgcagaagatgggt
tacgtacctggcagaggtcttgggaagaatgcacaaggaattgtggcaccaattgaggca
aagatgaggaagggaaaaggagcaattggtgcttatgggtctgaacgaacagaacagtca
ctgaaggactttcccattgttgactccgatgaagaagcggatgaggactttcagcaggag
atgagccagtggcgcaaggatcccgcaggtggaaagaagaaacccaagtacaccttcaag
actgtagaggagcttaaagcgaagggagcaaccagcctgggcaggaaaatggctacccct
cagaccgaactttcacaagtcaaggttatagacatgactggaaaggagcagaaagtgtat
tacagttacagtcagatgaaccagaagcacgatattcctgatgacacacactccccagtt
aaagatgccaagtcggagggcttttccctcccagagctggagcacaatctccaactgctc
attgaaatgactgagcaagagatcatccagaatgaccgccagctgcagtatgagagagac
atggtggtcaacctctcccatgagaatgagaagctctctgaagtccttgcccatgaggag
aaaatcatagacaagctcagcagcatcttgcagattgtggaagactgcgagaagagactg
ctgcccaactgtgaaaatccattgaccctggaagaatgtgcaaatatttttgagatgctg
caggagaaatattttgaggagtataagatgtttgaccttgcagaactctccattgccgtt
gtatttccactgctgaaagaattctttaagacttggaatccgttgcaggataataattat
ggcttagacgtcatgtcccaatggaggaaacttctagaacgagaccagctgcatcatgga
gggtgcgatatgttgtcgttggacccctaccacaggttggtgtgggaggtatggatgcca
tatgtccgtaatgttgtatcccaatggctaccccggaattgtgctcctatggtagatttc
ttggagaactggatgcctgcagtccctctctggatattggataatattcttgaacaattg
atctttccgaaattacagcgtgaggttgagaactggaacccactgacagacacagtccca
atccacgcctggattcatccatggcttccacttatgcaaatgcgcttggagcccctgtat
tcacctatccgcaacaaactttccaacgcattgcagaaatggcatcccagtgactcttct
gcaaaactgatcctgctgccctggaagaatgtgttcacaccaggatcttgggaagccttc
atgttgaaaaatattgttccaaagttagggatgtgtttatcagagtttgtgatcaatcct
caccaacagcacatggacacattccactgggcgatggattgggaagacatgatctcacct
tccagcctcataggaatgcttgagaaaaacttctttccaaaatggttgcaggtgctatgt
tcttggctcagtaacagtcccaattatgaagaagtcacaaaatggtacttgggctggaag
tccatgttttctgaccaggtgttggcccacccaacgatcaaggagaagtttaatgaagcc
ctcgacatcatgaaccgggctgtcgcctccacagttggtggttacatgcagccaggagct
cgggaaaacattgcatatctcacgcacacagagcgccggagggactttcagtacgaggca
atgcaggagcgccgcgaggctgagaatatggcacaccgtggtattggtgttagctcatcc
tccataccaatgaatttcaaggacttgatccaggcaaaggccgaagagcacaatattgtc
ttcatgcccttgatgggcaaacgtcatgagggaaaacaactctacacctttgggaggata
gtcatttacattgacagaggggttgtgtttgtacagggggagaaaacgtgggtgccaaca
tcacttcagagcctcattgacatggctaagtaa
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