Scyliorhinus canicula (smaller spotted catshark): 119954681
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Entry
119954681 CDS
T11175
Symbol
xpot
Name
(RefSeq) exportin-T isoform X1
KO
K14288
exportin-T
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Pathway
scau03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
119954681 (xpot)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
scau03016
]
119954681 (xpot)
Transfer RNA biogenesis [BR:
scau03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
119954681 (xpot)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Exportin-T
Xpo1
CRM1_C
HbrB
TPR_TNPO3_IPO13_3rd
Motif
Other DBs
NCBI-GeneID:
119954681
NCBI-ProteinID:
XP_038636075
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All DBs
Position
20:34168123..34227553
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AA seq
966 aa
AA seq
DB search
MMDEQALLGLNPNADASFRQRALAYFEQLKVSQHGWQVCAEALAQGIYSDDHVKFFFVQV
LEYQIKFRYAILTGAQHQLIRQTMMTWLQAQTVSPHTEKTFIRNKAAQVFALLFLAEYLT
KWPKFFFDILSVVGLNPRGVDLYLRILMAIDAEVVDRDIVHTAEVRTECRRNTLIKDAMR
EQCIPNLVESWYQILNTYQETNSELTCQCLEVVGAFVSWIDLNLIANDRFVNVLLSHMSV
EVLREEACDCLFEIVNKGMDPIDKTKLVESLCQVLLASGFFNTEQEEDVDFLARFSKLAN
GMGQALITSWGKLVKAGDVKNSQVTLQAVEAKVPLLLKLLVHEDDDISSNIIGFCYDYLH
MLKQLPVLTEQQKANVEAIMHAVIKKLTYDEEFNFENEGEDEAMFLEYRKHLKLLLDRLA
QVSPELLLAAVRRVFNATLENWQNTRFMEMEVALRLLFMLGEAIPASHGAHFSGDSTKAS
VLQEMMHTLVTSGVSQYQHTSVALEFFEIVVRYEKFFTVEPQHIPTVLMAFLDHRGLRNS
SPKVRSRTAYLFSRFIKSLSKHMNPYIEDILNRIQDLLVLSPSENGFQTLLSSDDQLFIY
ETAGVLIVNSDYPAERKQALMRDLLTPLMEKFKVFLAKLLIEQDGERQAALADCLNHAVG
FASRTSKAFSNKQTVKQCGCSEVYRDCLQTFLPALSCALQKEVLRSGVRTFLHRMIICLE
EEVLPFIPTASEHMLKDCEAKDLQEFIPLINQITAKFKTQISPFLQQVFMPLVQAIFEVL
SRPAEENDQTTALENQMLRRSYFAFLQTVAGSGMSEVIANQGVQNVEHVLVTVIQGAVEF
PDPIAQKTCFIILSKLVELWGGKDGLLGFEDFIYKHIVPACFLAPLKTTFDLADAQTVLA
LSECAVTLKTIHLKRGPEFIQYLQQEYLQSLQVAPEIIQEFCQALQQADGKIFKNYLKVF
FQRAKQ
NT seq
2901 nt
NT seq
+upstream
nt +downstream
nt
atgatggatgagcaagcactgttgggtttgaacccaaatgccgatgccagttttagacag
agggcattggcatattttgaacagctgaaggtttcccagcatgggtggcaagtgtgtgct
gaagcattggcacagggaatatacagtgatgaccatgtaaagttcttttttgtgcaagta
ttggaatatcaaattaaattcaggtatgccattctaactggagcgcaacatcaactcatt
agacaaactatgatgacctggcttcaggctcaaacggtgagtccacacacagagaagact
tttattcgtaacaaagcggctcaagtctttgcgctgctttttttagctgagtatctgact
aagtggcccaagttcttctttgacattctctctgtcgttggcctcaatcctcgaggagtt
gatctttatctgcgaatccttatggccatcgacgcggaggtggtagatcgggacattgtt
catacggcagaggtaagaacggagtgtagacgaaatactttaataaaggatgcaatgagg
gagcaatgtataccaaatcttgtggagtcctggtaccagatcctgaacacctatcaggaa
accaactctgagctaacatgtcaatgccttgaggttgtgggagcctttgtatcctggatt
gacttgaatctgattgccaatgacaggtttgtgaatgtgctgctcagtcacatgtcagtg
gaagtcctccgtgaggaagcctgtgactgtctatttgaaatagtaaataaaggcatggat
cctattgataagactaaacttgtagaatcgctttgtcaggtgctactggcttctggcttc
ttcaacaccgagcaggaggaagatgtcgacttccttgcaaggttttccaaactagctaat
gggatgggccaggctttgataaccagttggggtaaactggtaaaagcaggggatgtgaag
aacagccaagtgactcttcaggctgtggaagctaaagtgcctcttctgcttaagctgctt
gtgcatgaagatgatgatatttcctcgaatataattggtttctgctatgactaccttcat
atgcttaaacaacttcctgtactgactgaacagcaaaaagccaatgttgaggcgataatg
cacgcggttataaagaaattaacttatgatgaggaatttaattttgaaaatgagggtgaa
gatgaagccatgttcctggagtacagaaaacatttgaagttgctgttggaccgactggca
caggtttcacccgaattacttttagctgctgtccgaagggtcttcaacgcgacactggag
aactggcagaatacaaggttcatggaaatggaggtggccctgaggcttctattcatgctg
ggagaggcaatcccagcgtcccatggtgcgcacttctcaggagatagcacaaaagccagt
gttttgcaggagatgatgcacacattggtgacatctggagtgagtcagtaccagcataca
tcggttgcattggagttttttgaaatagtagtacgctatgagaagttttttactgtagaa
ccgcagcacattcctactgttctgatggcatttttagaccacaggggactgcgaaatagt
agtccaaaagttcgaagtaggacagcgtacctgttctccagattcattaaatctttaagt
aaacatatgaatccttacatagaggacatcctgaaccgaatacaagacctcctggtgctt
tctccttcagagaacggtttccagaccctgttgagcagtgatgatcaactgtttatttat
gaaacagcaggggtattaattgtgaatagtgactaccctgcagaaaggaaacaggctttg
atgagggatttgcttactccgctaatggaaaaattcaaagtgtttttggcgaaactccta
atagagcaggatggggagaggcaggctgcactggcagactgcttaaaccacgcggtgggt
tttgcaagccggaccagtaaggccttcagcaacaagcagacggtgaaacagtgtggctgc
tcggaggtgtaccgcgactgcttacaaacattcctgccggcgctgagttgtgctttgcag
aaggaggtgctgcgaagtggtgttcggacctttcttcaccgaatgatcatttgcttagag
gaggaggttcttccgttcattcctactgcctctgaacacatgcttaaggactgtgaggca
aaggatcttcaggaatttattccgcttattaatcaaattacagcaaaatttaagactcaa
atttcaccgtttttacagcaagtatttatgcccttggttcaagctatatttgaggtatta
tcacgacctgcagaagaaaatgatcaaactactgcacttgaaaatcagatgttacgcaga
agttactttgcatttctgcagactgttgcagggagtggaatgagtgaggtcattgccaat
caaggtgtacagaatgtagaacacgtcctggttacagtcattcaaggagccgtagaattt
ccagatccgatagctcagaaaacctgctttatcatactttccaaactagtcgaactttgg
gggggtaaagatggcctcttaggattcgaagacttcatctacaaacacattgtcccagct
tgctttctggcgccacttaaaacaactttcgatttagctgatgcacaaacagtcttggct
ttatcagagtgtgcagtaacattgaaaaccattcatctcaaaaggggacctgaattcatt
caatatcttcagcaagaatacctgcagtcattgcaggtagccccagaaataatccaggag
ttctgtcaagcgcttcagcaagctgatggaaaaatctttaaaaattatctaaaggtattc
tttcagcgggcaaaacagtga
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