Scyliorhinus canicula (smaller spotted catshark): 119954709
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Entry
119954709 CDS
T11175
Symbol
lrrn3a
Name
(RefSeq) leucine-rich repeat neuronal protein 3
KO
K24492
leucine-rich repeat neuronal protein 1/2/3
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
scau04990
]
119954709 (lrrn3a)
Domain-containing proteins not elsewhere classified [BR:
scau04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
119954709 (lrrn3a)
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Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_5
LRR_4
LRR_9
I-set
Ig_3
ig
fn3
Ig_2
LRRNT
LRRCT
LRR_EndoS
Pur_ac_phosph_N
Ig_PDGFR_d4
C2-set_3
Fn3_ELFN
Motif
Other DBs
NCBI-GeneID:
119954709
NCBI-ProteinID:
XP_038636116
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All DBs
Position
20:7344561..7407998
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AA seq
709 aa
AA seq
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MKDASFNACFFVGLAVTAIVQTVGRNKDCPKSCICEIRPWFTPRSVYMEAPTIDCNDLNL
DSLPQRIPAETQVLLLQSNNISKIENKIDYLVNLTEIDLSQNNFLAICDINLGKMLQLMS
LHMEENKLTELPDSCLPGLTNLQELYVNHNQISSITKGAFIGLDNLLRLHLNSNELTMIK
SDWFEAIPSLEILTIGENPITKIQDLSFKPLINLRSLVLAGIKLSELGDNTLVGLNNLES
ISFYDNRLVTVPQAALQKVPNLKFLDLNKNPIQRIRQGDFKNMLHLKELGINNMAELVSI
DCLALDNLPELTKIEATNNPKLSYIHPNAFYKAPQLETLMLNSNALSALYRGTVESLPKL
QEVSIHSNPIRCDCVIRWINMNKTRIRFMELQSLFCFDPPEFKGQHVREIPFREMTDVCL
PLIASESFPSHLNLDSGSSASLHCRATGQPGPEIYWITPSGNKLLPNTATDKYNVHLEGT
LDLFNISNKEAGLYTCVAHNLVGADLKKVVVTVNGSFAQSMNKSLNIRIEEVTPHSVLIS
WEAVTNRVSSNIRWSGRVGSETPQLTFTARVPTDMRVYNLTHLNPSTEYEVCVRVADIHQ
QTEKKCVNVTTNGLDPAVQSSGQTTTSALVAVLGAVFGVISMTCLYSCATWKMKCDSSHS
YLEKYRPNKATFPSNTFYPPVINLWGTVKEKNGPLEVKATVIDVSASCS
NT seq
2130 nt
NT seq
+upstream
nt +downstream
nt
atgaaggacgcatcgttcaatgcctgcttttttgttgggcttgcagtcactgcaatagtg
caaacagtgggaagaaataaggattgcccaaagtcctgcatttgtgaaatcagaccatgg
ttcacaccaaggtccgtttatatggaagctcctacaatagactgcaacgacttaaatctg
gattcgcttccacaaagaataccagctgagacgcaggtcttgctactgcagagtaacaac
atttcaaaaatcgagaacaaaatagactatttggtcaatctcacagagatagacctgtct
caaaacaattttttagcaatctgtgacatcaacctgggaaaaatgcttcagctgatgtca
ctgcacatggaggaaaacaagctgactgagttgcctgacagctgtttgcctggtctcact
aacctgcaggaactctatgttaatcataaccagatttccagcattaccaaaggagcattc
ataggtctcgataaccttctcagactgcatcttaattctaacgaattgacaatgattaaa
agtgactggtttgaggctatcccaagcttggagatactaacgataggagaaaatcccatc
actaaaattcaagacttgagcttcaaacccctgatcaatctacgcagtttggtcttagcc
ggaatcaagctctcagaactgggggacaataccttagttggtctgaacaatttagagagc
atttctttttatgacaataggcttgtcactgtgccccaggctgctcttcagaaagtcccc
aatctcaagttcctggatttgaataaaaatcctattcagagaatacgacaaggggatttc
aaaaatatgttgcacttgaaagagctgggcattaataatatggcagagctggtttctatt
gattgtcttgcccttgataatttgcctgaactaacaaaaattgaggctacaaacaaccca
aagctttcctatatccatccaaatgcattctacaaagctccccaacttgaaacattaatg
cttaacagcaatgcactgagtgctctctataggggcacggtggaatctttacctaaactg
caggaagtcagcattcacagtaatccaatcagatgtgactgcgtcattcgctggattaac
atgaataaaacacgcattcgattcatggaactacaatccttattttgtttcgacccacct
gagtttaaaggtcagcatgtcagagagattcctttccgagaaatgacagacgtgtgcctt
ccattaatagcctcggaaagtttcccttcccatctaaatttagacagtgggagctcggca
tctcttcactgccgagccacaggacaaccggggcctgaaatctactggatcacaccatcc
gggaataaacttcttcctaacactgcaaccgataagtacaatgtacaccttgaaggaaca
ttggatttatttaatataagcaacaaggaggcaggcctgtatacctgcgtggcccacaat
ctggttggagcggatttgaaaaaggttgttgtgacggtgaatggatcatttgcacagtcc
atgaacaaatcgttgaatatcaggattgaagaagtgacaccgcattctgtcctgatttcc
tgggaggctgttacaaacagggtgtcgtcaaatattaggtggtctggcagagtgggttct
gaaaccccccaacttacctttacagccagagtcccgacagatatgcgcgtgtataacctc
acacatctgaacccatccactgagtatgaggtatgcgttcgtgtggctgacattcatcaa
caaactgaaaagaaatgtgtcaacgtcacgacaaatggattggacccagccgttcagtca
agtggacaaactacaacctcagcacttgtggccgtccttggtgcagtctttggtgtcatt
agcatgacatgcctctactcttgtgccacttggaagatgaaatgtgattccagccacagc
tatttggaaaaatacaggccgaataaagcaacatttccatcaaacaccttttaccctcct
gtcatcaatctttgggggacagtaaaggagaagaacgggccgctggaagttaaagccact
gtaatagatgtgtcggcaagctgttcttaa
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