Scyliorhinus canicula (smaller spotted catshark): 119954910
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Entry
119954910 CDS
T11175
Symbol
nfkbiab
Name
(RefSeq) nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha b isoform X1
KO
K04734
NF-kappa-B inhibitor alpha
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Pathway
scau04210
Apoptosis
scau04519
Cadherin signaling
scau04620
Toll-like receptor signaling pathway
scau04621
NOD-like receptor signaling pathway
scau04622
RIG-I-like receptor signaling pathway
scau04623
Cytosolic DNA-sensing pathway
scau04625
C-type lectin receptor signaling pathway
scau04920
Adipocytokine signaling pathway
scau05132
Salmonella infection
scau05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
119954910 (nfkbiab)
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
119954910 (nfkbiab)
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
119954910 (nfkbiab)
04621 NOD-like receptor signaling pathway
119954910 (nfkbiab)
04622 RIG-I-like receptor signaling pathway
119954910 (nfkbiab)
04623 Cytosolic DNA-sensing pathway
119954910 (nfkbiab)
04625 C-type lectin receptor signaling pathway
119954910 (nfkbiab)
09152 Endocrine system
04920 Adipocytokine signaling pathway
119954910 (nfkbiab)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
119954910 (nfkbiab)
09171 Infectious disease: bacterial
05132 Salmonella infection
119954910 (nfkbiab)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
scau03000
]
119954910 (nfkbiab)
04131 Membrane trafficking [BR:
scau04131
]
119954910 (nfkbiab)
Transcription factors [BR:
scau03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Ankyrin only
119954910 (nfkbiab)
Membrane trafficking [BR:
scau04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Selective cargos
119954910 (nfkbiab)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_3
Ank_4
Ank_5
ANK_LRRK2
T4SS_AnkD
Motif
Other DBs
NCBI-GeneID:
119954910
NCBI-ProteinID:
XP_038636515
LinkDB
All DBs
Position
2:complement(72636351..72639465)
Genome browser
AA seq
360 aa
AA seq
DB search
MADPMLFKLDEQSRFGGKLDYPSGSMLPGVGKQAPLCEERCDSGIGSMSEKDEEVLREIR
ELSLADKPEAALCWKDFVSEDGDTFLHLAIIHTASDIVLEILKNTRVGDQYLSQQNNLKQ
TPMHLAVITQQPEVLKTLLWAGGDLRLGDINGNSPLHIACEMNLDSCVKTIRDFCTRHDI
QNLLDSKNYNGLTCLQLAVKSRLHQMVKYLILLGADINAQESSSGRTALHLAVEEQDPEM
VSLLVQSGADPNVRMYNDCTPYHLTLGRDNSRIQTQLLSVTDPSLCIVREEEQMWESESP
DWDVPSLMMTVQLEDSHSDVEATLFVHCYSEISVHQFICKELEMHIQMQLPNLMKTKPSK
NT seq
1083 nt
NT seq
+upstream
nt +downstream
nt
atggccgatcccatgttgtttaaattggatgagcagagcaggttcggtgggaagctggat
tacccgagcggctcgatgctgcccggagtcggcaagcaggcgccgctgtgcgaggaacgc
tgtgacagcggcatcggctccatgagtgagaaagacgaagaggtgctgcgggaaatccgg
gagttgagtctggctgacaagccggaggcagccctttgttggaaagacttcgtctcggag
gatggagatacatttctacatttggcgattatccatacagccagcgatattgtgttggag
atcctcaaaaatacccgtgttggggaccagtacctttcccagcagaataacctgaaacag
actcccatgcatctggcagtgatcacacagcagcccgaggtgctaaaaactttgctatgg
gccggaggagatctacgacttggggacattaatgggaactcccctcttcacattgcttgt
gagatgaatttggactcctgcgtgaagaccatccgtgatttctgcaccaggcacgatatc
caaaaccttctggacagcaagaactacaatggtctgacatgtttgcagttggcagtcaag
agcagacttcatcagatggtgaaatacttaattctgcttggagctgacattaatgctcag
gaatcatcaagtggtcggacagcactccatcttgcagtggaagagcaggatcctgaaatg
gtgtcactgttggtgcagagtggagcagaccccaatgtgcggatgtacaatgactgcaca
ccgtatcacctgactttgggaagagataattccagaatacagacacaactcctcagtgta
acagatccatccctatgcatagttcgggaagaagaacagatgtgggaatctgaatcacct
gactgggatgtaccttctcttatgatgactgtgcaattggaggacagccactcagatgtt
gaagctactctctttgtgcattgctactctgaaatttctgttcatcaattcatctgcaaa
gaactagagatgcatattcaaatgcagttacctaatttgatgaaaacaaaaccctcaaag
tga
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