Scyliorhinus canicula (smaller spotted catshark): 119954922
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Entry
119954922 CDS
T11175
Symbol
pwp1
Name
(RefSeq) periodic tryptophan protein 1 homolog isoform X1
KO
K14791
periodic tryptophan protein 1
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
scau03009
]
119954922 (pwp1)
Ribosome biogenesis [BR:
scau03009
]
Eukaryotic type
90S particles
Other 90S particles
119954922 (pwp1)
Pre-60S particles
Other pre-60S particles
119954922 (pwp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_THOC3
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_WDR3_1st
Beta-prop_WDR5
WD40
Beta-prop_CAF1B_HIR1
WD40_WDHD1_1st
Beta-prop_EIPR1
Beta-prop_WDR3_2nd
WD40_RFWD3
Beta-prop_WDR36-Utp21_1st
Beta-prop_RIG_2nd
WDR55
Beta-prop_EML_2
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_EML
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR41
Beta-prop_TEP1_C
WD40_Gbeta
Beta-prop_WDR90_POC16_2nd
WD_LRWD1
ANAPC4_WD40
WD40_MABP1-WDR62_2nd
Beta-prop_SCAP
Beta-prop_WDR75_1st
Beta-prop_WDR19_1st
Beta-prop_Aladin
Beta-prop_IFT122_1st
Beta-prop_WDR35_TULP_N
Beta-prop_ACSF4
Beta-prop_SPT8
Rsc14
Motif
Other DBs
NCBI-GeneID:
119954922
NCBI-ProteinID:
XP_038636555
LinkDB
All DBs
Position
20:complement(39849068..39893529)
Genome browser
AA seq
497 aa
AA seq
DB search
MSSLRTCVSWVPRGMARETPEKVTLTPQELEELIHNAREEFDDQEEGEEQAVDRNEEELM
DGTDSAASRDSKTLEEGEEEEDKDSLAEYDLDRYDEEEGGVNLGDSLGGLTVYASNEDDP
YVTLKNTDHYEDEDFKIKPTDNLIVVGKAEKDCCSLEIYVHNQEEQSLYVHHDVLLPAYP
LCVEWLNFDPNPEALTGNYAAVGNMTPVIDVWNLDVVDCLEPVFSLGNKKAKKKKQGRKG
AASAGKGEDGHTDAVLDLSWNRHIRTVLASASADKSVILWDMSQKKPVTHLSSHTDKVQT
LCWHPFEAQTLLSGSFDKSVILYDCRSPKESHRSWRFSGEIERVTWNHFSPCNFLASTED
GFVYCLDARSDKPLFTLKAHDGEVTGLELSSEIQGCLVTSSSDKHVKIWDILGNKPSLVH
SRDMKMGVVFCGACCPDLPFVYCFGGQKGGLRMWDISTVSAVNMAFGSRERLQVAAPWSS
SVTGPVTSSTTQNTMES
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcctcagaacctgcgtcagctgggtcccccgcgggatggcgagggaaaccccg
gagaaggtgactctgactccacaggagttggaggaattaatccacaatgcaagagaagaa
tttgatgatcaggaggagggggaggaacaggcagtggataggaatgaggaggagttgatg
gatggaacagacagtgctgcctctcgtgattccaagaccctggaggagggcgaagaggag
gaagataaagacagcctggcagaatatgacctcgatagatatgatgaggaggaaggtggc
gtgaatcttggtgatagtttgggaggactcacggtctacgctagcaatgaagatgatcca
tatgtcactctgaaaaatacagaccactatgaagatgaagatttcaaaatcaagcccact
gataacctaatagttgtggggaaggccgaaaaggattgctgcagccttgagatatacgtt
cataaccaggaggaacaatctctctatgttcatcatgatgtgctgctacctgcttacccg
ctgtgtgtcgaatggctcaactttgacccgaatccagaagcactaactgggaattacgct
gcagtgggcaacatgactcctgtgattgatgtgtggaatctggatgtggtcgattgtctg
gaaccagtcttcagcctggggaacaagaaagcaaagaaaaagaagcaaggcagaaagggt
gctgcaagtgcagggaaaggagaggatggacacactgatgcggttcttgacctttcatgg
aacagacacatcaggaccgttctggccagtgcatctgctgacaagtcagtgattctctgg
gatatgtcgcagaagaaacctgtgacgcatctctcttcacatacagacaaggtgcagaca
ctctgctggcatccatttgaagcacagacactcctttctggatcatttgataagtcagtc
atactttatgactgtcggagtccgaaggaaagccatcgcagctggaggttcagtggggaa
atcgagcgagtgacgtggaatcatttttcaccatgtaacttcctggccagcacagaggat
ggttttgtttactgtttggatgctcgatcagataaaccacttttcacactcaaagctcat
gacggagaggtaacgggcctggaactcagtagtgaaatccaaggctgcctggtaacgtca
tcttccgataaacatgtgaagatttgggatattttggggaataagcccagcttggtgcat
tccagggatatgaaaatgggtgttgtattctgtggagcttgttgtccggacttgccattt
gtctactgttttggaggacagaagggaggcctgcgcatgtgggacatcagcacggtctct
gcagtgaacatggcatttggatctcgtgaaagattacaggtagctgcaccctggagttca
tctgttacaggccctgtgacgagcagcacaacacagaacacaatggagtcctag
DBGET
integrated database retrieval system
