Scyliorhinus canicula (smaller spotted catshark): 119954975
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Entry
119954975 CDS
T11175
Name
(RefSeq) LOW QUALITY PROTEIN: leucine-rich repeat-containing G-protein coupled receptor 5-like
KO
K04308
leucine-rich repeat-containing G protein-coupled receptor 5
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Pathway
scau04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
119954975
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
scau04030
]
119954975
G protein-coupled receptors [BR:
scau04030
]
Rhodopsin family
Others
R-spondin
119954975
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
LRR_14
LRR_1
7tm_1
LRR_9
LRR_LRWD1
LRRNT
LRR_R13L1-DRL21
LRR_Zer-1
TMEM40
Motif
Other DBs
NCBI-GeneID:
119954975
NCBI-ProteinID:
XP_038636667
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Position
20:complement(24356242..24557942)
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AA seq
913 aa
AA seq
DB search
MRRLPLSPPPLLLLLLLLLLCFPSSALLAEPEQPRKSGCPTPCQCEEDGVLVRLDCSDLG
LTVIPENLSLFTSYLDLSMNNITELPQNGLFNLHFLEELRLAGNDLTHIPAGAFAGLYNL
KVLMLQNNRLGAVPEEALQNLQSLQSLRLDANHISVVPPNCFNGLVSLRHLWLDDNALAD
IPVKALSSLPCLQAMTLALNRIPHIPDYAFGNLSSLVVLHLHNNRIRSLGKKCFDGLHSL
ETLDLNYNNLDEFPVSIKTLTNLKELGFHSNNIQSIPEHAFVGNPSLLTIHFYDNPIQFV
GKSAFQHLPELRILSLNGATEITEFPELTGTLSLESLTLTGARIVSLPSTVCQQLPNLQV
LDLSYNWIKVLPSFSGCQKLQKLDLHHNKINEIQHDTFRQLTALRSLDLGWNNIEFIHQE
SFLSSSSLTKLDLTFNLLSSLPVSGLSGLTHLKITGNQALQDLLPIESLRNLRVLEMPYA
YQCCAYGSCENSYKLTNQWEKAENTSDDEVHKRDAGMLSGQDDQDLDDLLIDFEEDSKVH
HSVQCTPTPGPFKPCDHLFGSWMIRLGVWTIVFLSLVCNGLVAATIFGSPALISPPKLLI
GLMSLVNTLMGVYSGILAIVDLWTLGKFAKYGAWWENGIGCQVAGSLSVFASEMSIFLLT
VAAVERSLSTRCDMKQGKTLGSIKIAATFCVILASIIAMLPLFHIGDYGISPLCFPLPFG
EPSTLGFLVALVLLNSLCFLVMTITYTKLYCGLEKGDLQSLWDCSMVKHVAWLLFTNCIL
YCPVAFLSFSSLMNLTVISPEVIKSILLVILPLPGCLNPLLYILFNPHFKDALGHLRKHG
RLWRRSTQRSLASINSEDAEKQSCDSTQELVTHPGSRTATGTSCDSVNNMFSPSTYQMVE
TDEKSSANFVHCH
NT seq
2742 nt
NT seq
+upstream
nt +downstream
nt
atgaggcggctcccgctctccccgccgccgctgctgctgctgctgctgctgctgctgctg
tgcttcccctccagcgccctgttggcagagcctgagcagccgaggaaaagcggctgcccg
accccctgccagtgtgaagaggacggagtcctggtgcggctggactgctcggatctgggg
ctgaccgtcatccctgagaacctcagcctcttcacctcctatctggacctcagcatgaac
aatatcactgagctgccccagaatggacttttcaacttgcatttcctggaggagttgcgt
cttgcaggaaatgacttgacacacatccctgcgggagcatttgctggtctttacaatctt
aaagttcttatgttgcagaacaaccgcttgggagcggttcccgaagaggcactacagaac
ttgcagagtctccagtcgctgcgactggatgctaaccatatctctgttgtgccaccaaac
tgtttcaacgggctagtttcactccgacatttgtggctggatgacaacgccctggcagat
atcccagtcaaagctctgagcagtttaccttgcctacaagccatgaccttggccctgaac
agaattcctcatatcccagactatgcatttgggaacctttccagtttggttgttctgcat
ctccataataatcgaatccgctccctgggaaagaaatgctttgatggtctccacagcctg
gaaactttagatttgaactacaacaatctggatgaatttcccgtttcaataaagacatta
accaaccttaaggaattggggtttcacagcaacaacatacaatcaatccctgaacatgca
tttgttggcaatccatcacttctaacaatccatttctatgacaatcctattcaatttgtt
ggaaagtctgcttttcaacatctaccggagttacgaatactctcactaaatggagccaca
gaaataactgaatttcccgaacttactggaaccctaagtctagaaagtctgactctgaca
ggagcacgaattgtctctcttccgagcactgtttgccagcagctaccaaatttgcaagtc
ttagacctgtcttacaactggatcaaggttctcccaagtttctctggctgccagaagctt
cagaagctggacctgcaccacaacaaaatcaatgaaatccagcacgacactttccgacag
ctcactgcactgcgatcacttgaccttggttggaacaacattgaattcatccatcaagaa
tcatttctttcttcatcatctttaaccaaacttgacctcaccttcaaccttctgtcgtct
cttcctgtctctggactaagtgggttaacacatctaaaaataaccggcaatcaagcccta
caagatttgttgccaattgaaagcctccggaacttgagggtactagaaatgccgtatgct
taccaatgttgtgcatatggatcttgtgaaaattcctacaagcttacaaatcagtgggag
aaagcagagaacaccagtgatgatgaagtacataaacgagatgctggaatgctgtctggt
caagatgatcaggaccttgacgatttgctgatagactttgaagaagattcgaaagtccat
cattctgttcagtgcacaccaactccaggacccttcaagccctgtgatcacctgtttggc
agttggatgatacgtctaggtgtgtggaccattgttttcctctctcttgtctgcaatggt
ttagtcgccgcaacgatttttggatctccagcactaatttccccaccaaaactcttaata
ggcctgatgtcacttgtgaacactctaatgggggtttatagtggtattttggcaattgtg
gatctgtggacattgggcaaatttgcaaagtatggagcatggtgggagaatggaattgga
tgtcaagttgcaggttccctctctgtgtttgcctcagaaatgtccattttcttacttacc
gttgcagcagttgaacgcagtctatccacaagatgcgatatgaaacaaggaaaaaccctg
ggtagcatcaagatagcagctaccttctgtgttattctggcatccataatagcaatgctt
ccactgttccacattggcgattacgggatttctccactttgctttcctttaccctttggg
gagccatccactttaggctttcttgtggctctagtcttgctgaattctctttgcttcctt
gtgatgacaataacctacacaaagctttactgtggtttggaaaagggagacttgcagagc
ctgtgggactgctcaatggtaaagcatgttgcctggctgctcttcactaattgtattttg
tattgccccgtggccttcctgtcgttttcctccttgatgaacctcacggttattagtcca
gaagtaatcaagtcaatactcctcgtgatcctaccattgccaggatgcctgaatcccctg
ctttacattctttttaacccacatttcaaagatgctctgggacatctgaggaaacatggc
cggttatggaggaggtcaacgcagagaagcttggcctcgataaattcagaagatgctgag
aaacagtcatgtgattctactcaagaactggtgacacatccaggcagcagaactgccact
ggtacatcctgtgactcagtaaacaatatgttcagcccatccacttaccagatggtggag
accgacgagaagtcatcagcaaattttgttcactgtcattag
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