Scyliorhinus canicula (smaller spotted catshark): 119955000
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Entry
119955000 CDS
T11175
Symbol
met
Name
(RefSeq) hepatocyte growth factor receptor isoform X1
KO
K05099
proto-oncogene tyrosine-protein kinase Met [EC:
2.7.10.1
]
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Pathway
scau04010
MAPK signaling pathway
scau04020
Calcium signaling pathway
scau04510
Focal adhesion
scau04518
Integrin signaling
scau04520
Adherens junction
scau05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
119955000 (met)
04020 Calcium signaling pathway
119955000 (met)
09133 Signaling molecules and interaction
04518 Integrin signaling
119955000 (met)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
119955000 (met)
04520 Adherens junction
119955000 (met)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
119955000 (met)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
scau01001
]
119955000 (met)
Enzymes [BR:
scau01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
119955000 (met)
Protein kinases [BR:
scau01001
]
Receptor tyrosine kinases (RTK)
MET family
119955000 (met)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
TIG
Sema
PSI
Kinase-like
FixQ
SIT
Motif
Other DBs
NCBI-GeneID:
119955000
NCBI-ProteinID:
XP_038636715
LinkDB
All DBs
Position
20:11591211..11781310
Genome browser
AA seq
1392 aa
AA seq
DB search
MMLSTMNHPTSILSMLFGSLIVGLSNGECEPAKKHAGVDLNVQYSFPSFSSETLIQNLVL
HNRHIYVGAVNKIYVVNNGLEKLSEFKTGPVLESLSCSPCDRCEENGNSSANVWRNNTNM
VLLIETFYGDQLIHCGSARNGVCFLHNLQHDDPADIASNVQCMYSRRNNGPSKCPDCMAS
PLGTKVLMTKQAGFLKVYAGATLSSTPLAFPLHSLSIKRLKESEDGFQFLTEKSYMDVIP
RFRDAYPIKYLYAFESSGYVYFLTVQRESLNSQASHTRIIRLSLSDPYLHSYIEMPLECF
ITERRKKRSSNTEDFNLMQAAYATKPGSDLASQLGVSTEEDVLFAVFAQSKPGSTQPANR
SAVCAFPVKIINQLFEHFADDCCKKGLSKGLRHFYNTTDRYCVNKSSSAKQTYCGGTSDQ
VQMEIIFPARRLDLYFGQFRNVLLTSIAVFTQGKVTIANLGTATGRIIQAVVSRTDRLTP
HVNFQLDSSSVSPEVIVEQSGSEEGYVIVITGKKISRIPLTGPGCGHFLSCSKCLTAPSF
MRCGWCGAQCSRIQECTNQIWAHNICPPVISEISPLTAPFEGGTRLSICGKDFGALKAGK
ISAKLIAIEVGNAPCTLETNKSNKNRLLCTLEAVNATQDYNPVYVKLTLNRSLTTQMYGF
RFVNPAVTRIFPTHGRKSGGALLTLTGKYLDSGSRRQVLIGGKVCNLKSITETKIECTTP
AHTSLLSHSVVLKIDSAVREVKNSFTYVENPSIRNIYPVWSFSSGGSTVTVKGTNLNFVQ
SSQMVITVHQLPKALHVACRHVDALEVIYCQTPTLDPFELTLPAQGKASFIFDNVTVGSF
DFGYTENPLLNTFRVPKEIRKGGSNELEIKFQGAQIKPEAVDGKILTIGNQSCENIHLKP
NTLICIIPPELLQSRSEFDVAWRKANSSILLGKVIILENKNLTGLVGVVGVILLVPLLLG
VLVWRFKKKQKKDLNLDEVRNDGRTHTLHLDRLVNTRTRNSITAEMISHDSSDYRTTLQE
DPFQNLAQVASHRQAQFSHSDLTCILSNGDSDSTIPLLQNDVNINFCSLDSELLKEVQHM
VISTDELTTHTTEVIGRGHFGCVFHGTLLGQDGTNVHCAVKCLNRITCLEQVTQFLKEGL
IMKDFKHTNVLSLLGICLPHQGSPLVVLPYMKHGDLRHFIRDESHNPTVKDLISFGLHVA
KGMEYLASKKFVHRDLAARNCMLDENYIVKVADFGLARDIYEKEYYSINNKSGAKLPVKW
MALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVDSFDVTMYLLQGRRLLQPEYCP
DSLYEVMLKCWHPKLEARPTFSEVVSKISSILSTFTGDHYIQLNTTYVNLGCGVPYPPAY
SPQDNLDEDAHV
NT seq
4179 nt
NT seq
+upstream
nt +downstream
nt
atgatgctttcgacaatgaaccatccaacaagcattctttcgatgctctttgggagtttg
atagtgggtctgagcaatggcgagtgtgagcctgcaaaaaaacatgcaggtgtggacctg
aatgtgcagtacagctttcccagcttcagttccgaaacactgatacagaacttagtcctc
cacaatcggcacatatacgtgggagcagtaaataagatatacgtcgtgaataatggcctg
gaaaagctctctgaattcaaaaccggccccgtattggaatcactgagctgttcgccatgt
gaccgctgtgaggaaaatggtaacagctccgcaaatgtgtggagaaacaacaccaacatg
gtcctactgattgaaaccttttatggagatcagctcattcactgcggcagtgccaggaat
ggtgtttgtttcctccacaacctccagcatgacgaccctgctgatatcgcgagcaacgtt
cagtgtatgtattcacgccggaacaacgggcccagcaagtgcccagattgcatggccagc
cctctcggtacaaaggtgctgatgacaaagcaggctggatttctgaaagtgtatgcagga
gcaacactaagttctactcctctggcattcccgttgcattcgctatccataaaaaggtta
aaggaatctgaagatggttttcagttcctaactgaaaagtcttacatggatgttattcca
cgattcagggatgcctatcctatcaagtacctttatgctttcgaaagcagtggctacgtt
tattttttaactgtgcaacgtgaatcattgaactcgcaggcatctcacaccagaattatt
cgattaagcttgtctgatccttatttacattcctatatagaaatgccactcgaatgcttt
attactgagagacggaagaagagatcctcaaataccgaagacttcaatctcatgcaggcg
gcatatgcaacaaaaccaggttcagatcttgctagccagttaggagtttccacggaagag
gatgtcctttttgcagtatttgcacaaagtaaaccagggtcgactcaacctgccaatagg
tcagctgtctgtgcctttcctgtcaaaatcatcaatcaattgtttgaacatttcgctgac
gattgttgcaagaaaggtctctcaaagggtcttcgtcacttttacaacactactgataga
tactgtgtgaataagagttcatcagccaaacagacatattgtggaggaacgagtgatcaa
gtccagatggaaattatatttcctgcaagacgtctggatctgtattttgggcaattccga
aatgtcttgttaacttcaattgcagttttcactcaaggaaaagtaacgatagcaaatctt
ggaacggctactggtcgtattatacaggcggtggtttcccgaaccgatcgactgacgccc
catgtaaatttccagctggattctagctcggtatctcctgaagtaatagttgaacaatct
ggatctgaagaaggctacgtaattgtcatcacagggaaaaagatcagcagaattccttta
acaggaccagggtgtggccacttcttgtcctgcagtaagtgtttaacagcaccttccttc
atgcggtgtggctggtgtggagcacagtgctccagaatacaggaatgtacaaatcagata
tgggcccataatatctgccctcctgtcatcagtgagatctccccactgactgcacctttc
gagggtgggacaagactatccatttgtgggaaggattttggagcattgaaagctggaaaa
ataagtgctaaattgattgccatcgaagttggaaatgctccctgcacgttggagacaaac
aaaagcaacaagaacagactcctgtgcacgttggaagcagtaaatgccacgcaagattat
aatcctgtctatgttaaattaactttgaacagaagtttgaccacgcaaatgtacggcttc
cgttttgtgaatccagctgtaacccgtatcttcccaactcatggtcgcaaatcaggagga
gccttactcacccttacggggaagtacttggatagtggaagtagaaggcaagttttaatt
ggaggaaaagtgtgcaatctaaaaagcatcaccgaaacgaagatcgagtgcaccactcct
gcccacacctctctgctgtcacattctgtggttttaaaaatagactccgctgtccgcgag
gtcaaaaattctttcacgtatgtggaaaatccatccatccgcaatatttatccagtctgg
tcgttcagcagcggcggcagcacagttacagtgaaaggcactaacctgaatttcgtacag
tcctcccagatggtgatcacagtgcaccaattacccaaggctttgcatgtggcatgtaga
catgtggatgccttagaagtgatctactgtcaaactcccactctggatccctttgaactg
acactacctgcacaaggcaaagcttcctttatctttgataatgtcactgtgggatccttt
gattttggctacacagaaaatcctttgctgaatacatttcgagtccccaaggaaatcagg
aagggtggcagtaatgagcttgagattaaatttcaaggagcacagattaagcctgaagcg
gttgatggtaaaatcctaacaattgggaaccaaagctgtgagaacatccatctgaaacca
aatacattgatttgtattataccgccggagcttttacaatcaagaagtgaatttgatgta
gcgtggagaaaagccaattcatcaattcttctgggcaaagtaatcatccttgaaaataag
aatctgactggacttgttggtgtagttggagtaatattgctggttcctttgcttcttgga
gtattagtgtggaggttcaaaaagaaacagaaaaaagatctaaatctggacgaagtgcga
aatgatggcagaacgcatactctgcacctggataggctggtgaatacaaggacacgaaac
agtatcactgcggaaatgatatctcatgactcctctgactatcgaacgactctacaagaa
gatccatttcagaatttggcgcaggtcgcatcgcacagacaagcccagttttctcattca
gatcttacttgcatattgtcaaatggagactccgattcaaccatacctttgcttcagaat
gacgtgaacatcaacttctgcagcctggactcggaactattgaaagaagtgcagcacatg
gtaatcagtactgacgagctcacaacacacaccacagaggtgattggaagaggtcatttt
gggtgcgtattccatggaactctcttgggccaagatgggacgaatgtgcattgtgcagtg
aagtgtctgaatagaatcacttgcttagaacaagtaactcaattcctgaaggagggatta
ataatgaaagatttcaaacacaccaatgttctctctctgctgggaatctgtcttccacac
caaggatccccattggtggtgctgccatacatgaaacacggcgacctacggcactttata
agagatgaaagtcataatccaacagtgaaggatcttattagctttggacttcatgtcgca
aaaggaatggagtaccttgcaagcaaaaagtttgttcaccgagatcttgcagcaagaaac
tgcatgttggatgaaaactatattgtgaaagttgctgattttgggctcgcaagagacatt
tatgagaaggaatattacagcattaataacaaaagtggtgctaaactgccggtgaagtgg
atggcgctggaaagtctccagacacagaaattcacaacaaaatctgatgtgtggtctttt
ggagtactgttgtgggaattaatgacacgaggggccccaccttaccctgacgttgactcg
tttgatgttacgatgtatctgctgcaagggaggaggttacttcagcctgagtactgtcct
gattcactatatgaagtaatgctaaaatgctggcaccctaaactcgaagcacggccaacg
ttctctgaggtggtttcaaaaatatcgtccatcctttccactttcactggggatcactac
atacagttaaacacgacctacgtgaacctaggttgcggagtaccctatccgccggcttat
tcacctcaggataatttggatgaagatgctcacgtgtga
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