Scyliorhinus canicula (smaller spotted catshark): 119955067
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Entry
119955067 CDS
T11175
Symbol
ttc6
Name
(RefSeq) uncharacterized protein ttc6
KO
K24929
tetratricopeptide repeat protein 6
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
scau04990
]
119955067 (ttc6)
Domain-containing proteins not elsewhere classified [BR:
scau04990
]
Other domain-containing proteins
Tetratricopeptide repeat-containing proteins
119955067 (ttc6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_11
TPR_9
TPR_17
TPR_8
TPR_16
TPR_14
TPR_19
TPR_12
TPR_6
TPR_CcmH_CycH
ARM_TT21_N
TPR_BSK1_C
PPTA
ANAPC3
T7SS_EccA1_N
TPR_Slam
COPI_C
Motif
Other DBs
NCBI-GeneID:
119955067
NCBI-ProteinID:
XP_038636843
LinkDB
All DBs
Position
2:76025197..76589528
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AA seq
1751 aa
AA seq
DB search
MPDAPKIYERNFQLSKPEQSLTAAQQTFTAKAKSVDEIIASLRSGSHSTSQTASDQKIKG
LLERVFGYSYSSKSEEVTDVTAAQKKRDKVVSPKSPAGKTSVTDSQRRAEKHIKKKITGS
ITEVDHKVRLVEETTRDLDSAPISIITSPGTGKTPTSTDTFNFAQVTPSILFTSAVPGSS
LGALTNEEAEKVLALRGEVTFSDIINIKGNAFGTAKGISEDQQMLLEKEEQPLQQASALA
TWTAVNKARGYQTIHHFCTVEPSHVLPIDLQLASKLYYTPSRKGYGCSKLPESIQQEADE
ICSDKDFTSSKQQEIARLINEGIPTSEVTQENVQGGVRALPPLSSEFLLEWQRIAEYYVE
RPRIMLIGESMQIYKDATKLLWTPAFPKFAVPISHVKETLFPKLQVELDQVDDFAMETFQ
SDQDFDMDEEQENLEEKAAMLRTLFKKHSSLPDLRVFSFYSSNESFRNHFEMTTSESTVH
HPEEKRRIIVYMNLNKTIDKPSISLDKHYSLPNLCYFDESSRTISAPFQTLMKEIELQRQ
QLIQTSLQTLNEHMEIVSKSSLTTEVSQLLDSVTPSKLLVESQQPVTSISVVEPVVKTKK
PKRRKKIKAYMRKPLLPRKIAFAYRKLSMAAKPLNRSESLPSIVRLSTFGGKEPRTKVLR
RNSSLPTLFDFEGYVKKQGGVPKGAVAREWVRDIWNMWFDDVFPPLKPSSETAVDRKDSP
LASKEKESSHLHTDLKEIELLNLQPPTEQDETAMYPVAAESEVTRATLQSAISELTYQIA
VKGEATAFNYCRRGAVNRRLGQLKSAMEDLNKAIKLEPRLLNAYWQRHFIYLLQFKTANA
LDDLNFVLKHNKNHADAYTSKGDIYRNRGDITLAIINYSQGLKCRPDDDVHFKRAEMYEK
NNDLLMAMEDYLMAFNLNPKRTDAMIKRGLFYFENSNWHLAIQDLTTLIKWDPINAKARN
YRGQAYAKQGMFKEAIEDLSSAVHLDPNNWTAFYHRGCLLRKLNTEKALQDFSVSVLINS
EVENLDSFLHRGILYTELGEWQEAIFDFESVVKLDRSISFAHINLGLIFLLKMDHHYEAI
RRFTNALKAEPTSVRAYVCRAQANHKIHNLKSALKDITCAIHLQPQTHYFYLLRGQYLYE
MKNFELASFCIQYSAEINEAPDSSPIQQATVQLFLKNYDKAINILSALEKTTPILTLLGK
GQMKARKHEDAVISFQKVLDLESEVSDIKVTSKLKGRAELYYHMGLCYIEQNKLREAVDS
FNNALKLHPKFAKAYYQRGLCRMKLHEFNCIHDFHRALAMNPQLFEVYLSRAIYYAMQGR
ICKAILSCNEALKLEPRSIRAFLCRGALKFYSKAYELAVDDLTSAININSACILGYFNRA
VCYQKANDLQKALKDYGIVLLLGSQKKLHLKVLVNRGLLYLRIDDYCNALKDFQAATVEE
PENAHIHHAVAICCHKLLYLEEAVKGFNQAVKLDPFFADAYNGRGNVYMDSVHEAGIKQA
QKDFVRALHLDPKSLNTRLNLGYNFQVLGRFQKAWNQFTIAIDIDPTFEVAYEGRAVVNL
QMNNTFGAFQDINAALQISMSAKLLTNRGVISQFTGDLPNAMRDYQKAITLDHTYSLAYF
NAANLYFYNKQFSQAHDYYTKAIDLQPKDESALLNRAICRVLLRRAEEAFEDFAEAIKLS
PYSAHIYFNRANLYATLKQYKDAEKDYSQALQLMPDDALFYKLRADVRGHLGMTEEAVAD
YKQAIVIQETG
NT seq
5256 nt
NT seq
+upstream
nt +downstream
nt
atgccagatgcaccaaaaatatatgaaagaaacttccaactgagcaagccggagcagtct
ctgaccgcagcacagcaaacatttacagctaaggcaaaatctgttgatgaaatcattgct
tcactgcggtctggtagccacagcacctcccagactgcttcagaccagaagatcaaagga
ctcttggagagagtgtttggctacagttatagcagtaaaagtgaggaggttacagacgtc
actgctgcacagaaaaaaagagataaagtagtctccccgaaatcccctgcaggaaagaca
tcagtgacagattcccaacggagagctgaaaagcacattaaaaagaagattacaggatca
attacagaagttgatcataaagtcagattggtggaagaaaccacaagggatttggacagc
gctccaataagtataattacctctccaggaacaggcaaaacaccaacatctacggataca
tttaattttgcacaagtaaccccttcaatactatttacgtctgcggttccaggcagttcg
ctaggtgctctaaccaatgaggaagcagaaaaggttcttgcattacgtggagaggtcact
ttttctgatataattaatataaaaggaaatgcatttggaacggcaaagggaatttcagag
gaccagcaaatgctgcttgaaaaggaggaacagcctctgcaacaagcctcagcgctggcc
acatggactgcagtaaacaaagctcgaggatatcagactatccaccacttttgcactgtt
gagccgagtcatgtattacccattgatttgcaactggcttcaaagctgtactacactcca
agcagaaaaggatatggctgtagtaaacttccagagtcaatccagcaagaggcagatgaa
atctgttcagataaggattttacttcttcgaaacaacaggagatagcaaggctcattaat
gaaggaattcctacatcagaagtgactcaggaaaatgtacagggtggtgtcagagcctta
ccaccactttcatctgaatttctgttggaatggcaaagaattgcagaatattatgtggag
agacctagaataatgctcattggagaatcaatgcaaatttacaaagatgcaacaaagctg
ttatggacaccagcatttcctaagtttgcagttcctatttcacacgtgaaagaaacccta
tttcccaagttacaagtggaactggatcaagtggatgactttgccatggaaacattccaa
tcggatcaagattttgacatggatgaggagcaggaaaatttggaagagaaagctgcgatg
ttaaggacactttttaaaaagcacagctcattaccagatctacgagtgttttccttttat
tcttccaatgaatcattcagaaatcactttgagatgacgacctcagaatccactgtacac
catcctgaagaaaagcggagaataattgtatatatgaatttaaataaaaccattgacaag
ccttcgataagccttgacaagcattactctttaccaaacctctgctactttgatgagtcc
agccgaacaataagtgctccttttcaaactctgatgaaggagatagaactccagaggcaa
cagttaattcagacatcattacagacattaaatgaacatatggaaatagtatcaaaatcc
agtctgactacagaggtttctcagttattggattcagtgacaccaagcaaattacttgtt
gaaagccaacagcctgtaacctcaatttcagtagtggaaccagtggtcaaaacaaaaaaa
ccgaaacgccgaaaaaaaattaaagcctacatgagaaaaccattattaccaagaaagata
gcttttgcttacagaaaactgtcgatggctgcaaagcctctcaatagatctgaatccttg
ccttcaatagttcgcctgagtacatttggtggaaaagaacctcggactaaagttctccgg
cgaaattcaagccttccaaccttattcgactttgaaggttatgtgaaaaagcaaggggga
gttcccaaaggggcagttgccagagagtgggtcagagatatctggaacatgtggtttgat
gatgttttcccgccattaaaaccatccagcgaaacagctgtagatagaaaagatagcccg
ctggcttcgaaagaaaaagaatcttcccatttgcataccgacctgaaggagattgaactg
ctgaatctacagccaccaacagaacaagatgaaacagcaatgtatcctgtggctgcagaa
tctgaagtcactcgggctaccttgcagtctgcaattagtgagctaacataccagatagct
gtaaagggtgaagccactgcatttaattactgccgccgaggtgctgtaaacagaaggtta
ggacagttaaagtcagccatggaagatttaaataaagctattaaattagaaccaaggttg
cttaatgcctattggcagaggcatttcatttaccttcttcagttcaaaacagcaaatgca
cttgacgatctaaattttgtgcttaagcacaataaaaatcatgcagatgcttacacttca
aagggagacatttacaggaacagaggggacattacattggcaatcataaattattctcag
ggactcaagtgcagacctgatgacgatgtccattttaagagagctgagatgtatgaaaaa
aacaatgatctactgatggcaatggaagattatcttatggcttttaatttaaaccccaaa
agaacagatgctatgataaaacgtggtttattttattttgagaattccaactggcattta
gcgattcaagatctgacaacactgatcaaatgggatccgattaacgctaaggcaaggaat
tatcgtggacaagcatatgctaagcaagggatgttcaaggaagcaattgaggatctgtct
tctgctgtgcatttggatcccaacaactggacggctttctatcacagaggctgccttctg
cgaaagcttaacacagaaaaagcattacaggactttagtgtttcagtgcttatcaacagt
gaagttgagaatttggattcatttttgcatcgagggattttgtacactgaactcggtgaa
tggcaggaagcaatatttgactttgaaagtgttgtcaagcttgacagatccatttccttc
gctcatataaatcttggacttattttccttttaaaaatggatcatcattatgaagcaatt
cgtagatttacaaatgctttaaaggctgagccaacttctgtaagggcatatgtgtgtcga
gcacaggcaaatcataagatccacaatctcaaaagtgcattgaaagatataacctgcgcc
atccacctccagcctcaaacacattacttctacctgttaagaggacaatatctgtatgaa
atgaaaaactttgaacttgccagtttctgcatccaatattctgctgagatcaatgaagct
cctgactcatctccgattcagcaagccactgtacaattgtttctaaaaaattatgacaaa
gctataaacatcttgtccgccttggaaaaaacaacaccgatcttaactttgcttgggaaa
ggccaaatgaaagctcgcaaacatgaggatgcagtgatcagctttcagaaagttttggat
ctggaatctgaagtctctgacataaaagttacaagcaaattaaaaggccgtgcagaattg
tattatcacatgggtctttgctatattgaacagaataaactgagagaggcagtagattcg
tttaataatgcactgaaattgcacccaaagtttgctaaagcttattatcagcgaggattg
tgcagaatgaagctccatgaatttaattgtatccatgactttcacagagcccttgcaatg
aacccccaactctttgaggtctatctaagccgtgccatttactatgcaatgcaaggacgg
atatgcaaggccattctaagctgtaatgaagcactaaagctggagcctaggagtataaga
gcctttctttgcagaggggcactgaaattctacagtaaggcatatgagttggctgttgat
gatctaacttcagcaataaacattaatagtgcctgcatcttgggatattttaacagagct
gtctgttatcagaaagcaaatgatcttcaaaaggcactgaaagactacggaatagtacta
ctccttggtagccaaaagaaactgcatttgaaagtactagttaatcgtggcctgttatat
ctgaggattgatgattactgcaatgcattaaaggattttcaagcagcgactgttgaagaa
ccggaaaatgctcacattcatcatgctgtggcaatctgctgccataaacttctctattta
gaggaagctgtaaagggtttcaaccaagcagtgaaattggacccattttttgcggatgcg
tataatggacgtggaaatgtatatatggactctgttcatgaagctggaataaagcaagct
caaaaagactttgttcgagcacttcatttagatcctaaatctctgaatactagactcaat
ctgggatacaactttcaggtactgggaagatttcaaaaagcatggaatcagtttacaatt
gcaatcgatattgatccaacatttgaagttgcttatgaaggtcgagcagtggtcaatctt
cagatgaacaatacttttggagcatttcaggatatcaatgctgcattgcagatcagtatg
tcagcaaaactgctaacaaatcgtggagtgattagtcagttcacaggagatctgcccaat
gctatgagggactatcagaaagctataactttagaccacacttattcactggcttatttt
aatgcagccaatctctatttttacaacaaacagttttcacaggctcatgactactacacc
aaggcaattgatctgcaaccaaaagatgaatctgctttgttgaatcgagccatatgccgt
gttctgcttcgacgtgctgaagaggcatttgaagactttgcagaagctattaaacttagt
ccttattcagctcacatatatttcaacagagcaaacctctatgccactctaaagcagtac
aaagatgcagagaaagattactcacaagcactgcagctaatgccagatgatgctctattc
tacaaactccgtgcagatgtccgaggccatttgggtatgactgaagaagctgtagcagat
tacaaacaagcaatagttattcaagaaactgggtaa
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