Scyliorhinus canicula (smaller spotted catshark): 119955162
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Entry
119955162 CDS
T11175
Symbol
caprin2
Name
(RefSeq) caprin-2 isoform X1
KO
K18744
caprin-2
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
scau03019
]
119955162 (caprin2)
Messenger RNA biogenesis [BR:
scau03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
119955162 (caprin2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Caprin-1_C
Caprin-1_dimer
C1q
DUF4245
Motif
Other DBs
NCBI-GeneID:
119955162
NCBI-ProteinID:
XP_038637038
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All DBs
Position
20:complement(74322708..74392870)
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AA seq
1002 aa
AA seq
DB search
MKMKAEKRSPSSGGGGVSNGSAVLQGPAPFIQALAAASSQYQAYETYLENGMICLKHKIR
NIEKKKAKLDDYKERLKQEELNQDQLDAVDKYEEVIHNLEFAKDLQKTFVALNQELLKAQ
KKTLRREQLLRTEMEKRRLRTVLHIKYVLENFKQEHVQNDFRDGINGAFIISRKEISLLK
DFCKLVCPERNERMALEDQIELVSNQMWELLEGADKIVVGSTYKHLKEAISRLLNCAYFD
SIPVPHNGLLDDDAEDKIKEVKVTSKAVSGKDSESDRHFLCATEMQPREFLNRQYLNKND
YAVKPPEKPRNWEAEYVSRKQEDVPKKWDADYISRKQQEETPPPKKWDDEYIDKKQDKES
PKKWGAEYVNRKLEEQPKKWDAQCVDVPETKRWESGSVPKESAEPKRILPEPKEKRDRAL
KQETEAKQVSKVVQQVTAEFCSTSSLPNDPELRRQKLQDLMSQIQGTCHFIQDSMLDSDT
SSQSAIGSQKAAILLNAAVPKQQKQQNKTETIPSPPKTASELNVLSNIGASSGSDDQSSL
SGSTSDLSGQTPQNSAARNSENEAYIPPPQLYQASTPISESLTQKSLETNQVTPLPNNQT
ASSTAITPASQGRVLQTPVSNSPVSMKTTPFQAMQTVFNVNAPLPPRSEQEVKSDAPYSP
AFNQSLITASTQTPPQPVSLQNALTQDSLTEDTAPVANGTPVFLSHSQQNSALPRPNQAY
FGSRGAVRGVSRGRGIANVYRGSSNGYKGVQIGFDGYRGIPIPGNGTYGPFPNREYPGIP
YTQRESGYQQNYKRGVGVGPRGTMRGAGLNYSTAGWSDSSQMSSPEQDSEHYNSVDSGQG
DSRSMTPVDMPVTSQAATILPVHVYPLPQQMRVAFSTARTSNFTPGSLDQPIIFDLLLNN
LGETFDFQLGRFTCPVNGTYVFIFHMLKLAVNVPLYVNLMKNDEVLCSAYANDGAPDHET
ASNHAVLQLFQGEQIWLRLHRGAIYGSSWKYSTFSGYLLYQD
NT seq
3009 nt
NT seq
+upstream
nt +downstream
nt
atgaagatgaaagccgagaagaggtcgccttccagcggcgggggaggcgttagcaacggc
agcgctgtgctccaggggccggcccccttcatccaggctctggcggcggctagcagccag
taccaagcgtacgagacgtacttggagaatggcatgatctgcctcaagcataaaatccga
aacattgagaaaaagaaggcgaaactggatgactataaagaacgcctaaagcaagaagaa
cttaatcaggatcaattggatgctgtagataaatatgaagaagtgattcataatctggaa
tttgccaaggatctgcagaaaacctttgttgcactaaaccaagagctgctaaaagcacaa
aagaagacgctacgacgtgagcaacttctgaggactgaaatggagaaacgccgtcttcgt
acagtattgcacattaaatatgtactggagaacttcaaacaggagcacgttcagaatgac
ttccgagacggcattaatggtgcatttattatttctcggaaggaaatcagccttctcaag
gacttctgcaaacttgtttgccctgaaaggaatgaaagaatggcccttgaagatcaaata
gagttggtatcaaatcaaatgtgggagctattagaaggagctgataaaatagtggttggt
agcacctataagcacctgaaggaggcaataagcagattattgaattgtgcctactttgat
agtattccagtcccacacaatgggttgctggatgatgatgctgaagataaaatcaaagag
gtgaaagtaacttccaaggctgtgtcaggaaaggattctgaatctgaccggcattttctg
tgtgcgaccgaaatgcagccgagagagtttttgaacaggcaatacctgaacaaaaatgac
tacgctgtaaaaccgccagagaaaccaaggaactgggaagctgagtatgtcagcaggaag
caagaggacgttcccaaaaaatgggacgccgattatatcagtagaaagcagcaagaagag
acccctcctcctaaaaagtgggatgacgagtatattgataaaaaacaggacaaggaatcc
cccaaaaaatggggtgcagagtacgtcaacaggaagctggaggagcagcccaaaaagtgg
gatgcacaatgcgttgatgtgccagagacaaaaaggtgggaatctggatcggttccaaaa
gaatctgctgaaccaaagagaattctgcccgagcccaaagagaaacgggaccgtgcgttg
aaacaggaaaccgaagcaaagcaagtgtcaaaggtggtgcaacaggttactgcagaattc
tgctccacctcgtcgctgccaaatgatccagaactcaggaggcagaagcttcaagacctg
atgtcccagatacaagggacatgtcatttcattcaggattctatgttggattctgacacc
tcttcacaaagtgcgattggatcacaaaaggctgcaatcttgctcaatgctgcagttcca
aaacaacagaagcaacaaaacaagactgaaaccattccatctccacccaagactgcttca
gaattgaatgtcctttccaatatcggggcgagttcaggttcagatgatcagtcttcgcta
tctggttccacatctgatctttcagggcaaacgccacagaattcggccgcacgcaattca
gaaaatgaagcatacattccgccaccgcagttgtaccaagcgagcacaccaatcagtgaa
tctttaacacaaaagtccctggagacaaatcaggtgactcctctgcctaacaaccagact
gcctcaagcacagcaataactccagcatcccaaggacgggtactccagactccagtaagc
aattctccagttagcatgaagaccacaccctttcaggctatgcagactgtgttcaatgtg
aatgcaccgctgcctccaagaagtgagcaggaagtgaaatccgatgctccatattcccct
gcctttaatcaaagtttgatcacggctagcactcaaactccacctcagcccgtgtctctg
caaaatgcactgacgcaagattctttaacagaagatacggcacctgttgccaatggaacc
ccagtttttctatcccacagtcaacaaaatagtgctttgccaagaccaaaccaagcctac
tttggaagcagaggtgctgtaaggggagtttcacgtggcagaggaattgctaatgtgtac
cgtggttcaagcaatggatataaaggtgtacaaataggatttgatggctacagaggaatt
cccatacctggcaatggaacatatggaccttttccaaatagagagtacccagggatacca
tatactcaaagggagtctggttaccagcagaactacaagcgtggtgtcggagttggacct
cgtgggaccatgagaggagcaggtcttaattactcaactgcaggatggagcgattcatcc
cagatgagcagtccagaacaagacagtgagcactacaacagtgtggattctggccaagga
gactcgcgaagcatgacaccagtagatatgccagtgaccagccaagcggccaccatcttg
ccagtacatgtctaccctctccctcagcagatgagagtggccttctccacagcaaggacc
tctaactttactcccggttctctggaccagcctattatctttgaccttctgctcaataac
cttggagagacatttgactttcagctagggcgttttacctgccccgtgaacggcacctat
gtcttcatctttcacatgctaaagctggctgtgaatgtgccgctctatgtcaacctgatg
aagaacgatgaagtcctttgctcagcttatgccaatgacggtgccccggatcatgaaaca
gccagcaaccatgctgttcttcagctattccagggtgaacagatctggctccgattgcac
agaggtgccatctacggtagcagctggaagtactctaccttttctggctacctcttgtat
caggactga
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