Scyliorhinus canicula (smaller spotted catshark): 119955193
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Entry
119955193 CDS
T11175
Symbol
rfx4
Name
(RefSeq) transcription factor RFX4 isoform X1
KO
K09174
regulatory factor X 4
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
scau03000
]
119955193 (rfx4)
Transcription factors [BR:
scau03000
]
Eukaryotic type
Other basic domains
RF-X
119955193 (rfx4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BCD_RFX
RFX_DNA_binding
Pox_D5
Motif
Other DBs
NCBI-GeneID:
119955193
NCBI-ProteinID:
XP_038637105
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Position
20:complement(40686677..40833333)
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AA seq
733 aa
AA seq
DB search
MNMHCDILEDSDMDSTESWIERCLSESESKRFPNHTSLTNVSIGEEHEEKENNRASKPHS
TPATLQWLEENYEIAEGVCIPRSALYMHYLDFCEKNDTQPVNAASFGKIIRQQFPQLTTR
RLGTRGQSKYHYYGIAVKESSPYYDVMYSKKGAAWVNETGKKEVAKQTVAYSPRSKLGTL
LPEFPNVKDLNLPASLSEEKVSTFIMMYRTHCQRILDTVIRANFDEVQSFLLHFWQGMPP
HMLPVLGSTTVVNIVGVCDSILYKAISGVLMPTVLQALPDSLTQVIRKFAKQLDEWLKVA
LHELPENLRNIKFELARRFSQVLRRQTSLNHLCQASRAVIHSADITFQMLEDWRNVDLNS
ITKQTLYTMENSREEHRKLIVKLYQEFDNLLEEQSPTESYIEWLDSMVDRCVVKVAALRP
GSLKRVARQFLLMWSCFGTRVIRDMTLHSAPSFGSFHLIHLTFDDYVLYLLESLHCQERA
NELMRAMKGEGSSGDRREDAGQSDQSPQTQSPGPFSPAKSVTAEIQPASPVSSQSPEYTG
LTAPGAVQSYTWSLTYTVTTGSAPPDSPQPLPCMRSNNVPTASSTHRMPVYPHREEHGYT
GGYSYGSYSNQPPLPIQSQYPALTHDSLSSPLPYPAYHRSTSQYPFNSQAPRMEPCLMSS
APRLHSTAVTPRWPDVPSANSCYSNPTMHAARYGNSNEMYTPLVPRRSAEYEHAQHFPGF
AYINGEATTGWAK
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atgaacatgcattgtgatatactggaagattctgacatggattccacagaaagttggatt
gaaaggtgcctcagtgagagtgaaagcaaaaggtttccaaaccacacctccctgacgaac
gtgtccattggtgaggaacatgaagaaaaggaaaataaccgagcatcaaaaccgcattcc
actccagcgacactgcagtggctggaggagaactatgagattgcagaaggtgtgtgcatc
cctcgcagtgctctgtacatgcactatctggatttctgtgagaagaatgacacacagccg
gtcaatgcggcaagttttggcaagataattcgtcagcaatttccacaattaacgacgaga
agattaggaacaagaggccagtcaaaataccattattatgggatagctgtgaaggagagc
tccccatattacgatgtgatgtattccaagaaaggagcagcctgggtaaacgaaacgggg
aagaaagaagtggcaaagcagacggtggcatattcaccacgttccaagctgggcaccttg
ctgccagagtttccaaatgtcaaagacctaaatctgccagcgagcctctcggaggagaag
gtttccacctttattatgatgtatcgaactcactgtcagagaatcctagacacggtgatc
agggcaaatttcgatgaggttcaaagttttcttctacatttctggcaaggaatgcctccc
cacatgctccccgtcctgggctccaccactgtcgtgaacattgtaggtgtttgtgactcc
atattgtacaaggcaatctccggggttttgatgcccactgttctacaggcattaccagac
agtttgacacaggtgattcgcaaatttgctaaacagctggatgagtggctaaaagttgcg
cttcacgaacttcctgaaaatttaagaaatatcaaatttgaattggcaagaagattttca
caggttctcagacgccagacctcattaaatcacctctgtcaggcatcgcgggcagtgatc
cacagtgcggatataactttccaaatgttagaagactggcggaatgtggacctgaacagc
attaccaaacagaccctgtacaccatggagaattcccgagaggagcacaggaaactcatc
gtgaaattgtatcaggaatttgacaatcttttagaggaacagtcacccactgagtcctac
attgagtggctggattccatggtggacagatgtgttgtcaaggttgcagcattgaggcct
gggagcctgaagagagtggctcgacagttcctcttgatgtggtcctgctttgggacgaga
gttattcgggacatgaccttgcacagcgcgccgagttttggctcgttccacctaatccac
ttgacatttgatgactacgtactttatcttctggaatctctgcactgtcaggagagagcg
aacgaactaatgagggcaatgaaaggagaaggcagttcaggagacagaagggaagatgcg
ggacagtcagatcagagccctcaaacacaatcaccaggccctttctctcctgcaaaatct
gtcactgcggaaattcaaccggcctcacctgtcagcagccagtctcccgaatacactgga
ttaacagcaccaggagcagtccaatcatacacttggtctctgacgtatactgttacaaca
ggctccgcaccacctgacagcccacagccgctaccctgtatgagaagcaataatgtgccc
acagcgtcctcaactcacagaatgccagtctacccacacagagaggaacatgggtacaca
ggagggtacagctatggtagttacagcaatcagcccccacttcccattcagagtcagtac
ccagctctaacacacgacagcctttcctctccgttgccgtatcctgcttatcacaggagc
acctcacagtatcctttcaacagccaggccccgaggatggaaccgtgtttgatgagcagt
gccccacggctgcactctacagcagtgacaccccgctggcccgacgtgccttcagccaat
agctgctacagcaatcccaccatgcacgcggcacggtatgggaactcaaatgagatgtac
acgcccctggtcccgcggaggagtgccgagtacgaacatgcccagcattttcctggtttt
gcctacatcaacggggaagcgaccactgggtgggccaaataa
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