Scyliorhinus canicula (smaller spotted catshark): 119955481
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Entry
119955481 CDS
T11175
Symbol
pomt1
Name
(RefSeq) protein O-mannosyl-transferase 1 isoform X1
KO
K00728
dolichyl-phosphate-mannose-protein mannosyltransferase [EC:
2.4.1.109
]
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Pathway
scau00514
Other types of O-glycan biosynthesis
scau00515
Mannose type O-glycan biosynthesis
scau01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00515 Mannose type O-glycan biosynthesis
119955481 (pomt1)
00514 Other types of O-glycan biosynthesis
119955481 (pomt1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
scau01003
]
119955481 (pomt1)
Enzymes [BR:
scau01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.109 dolichyl-phosphate-mannose---protein mannosyltransferase
119955481 (pomt1)
Glycosyltransferases [BR:
scau01003
]
O-Glycan biosynthesis
O-linked Man type
119955481 (pomt1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PMT
PMT_4TMC
MIR
Motif
Other DBs
NCBI-GeneID:
119955481
NCBI-ProteinID:
XP_038637633
LinkDB
All DBs
Position
21:complement(65148767..65197245)
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AA seq
724 aa
AA seq
DB search
MPGLLKMPIIITVHVDVVLTILTVLGIGNRLWGLMYPKAVVFDEVYYGQFVSLYMKQMFF
IDDSGPPLGHMILAVGAYYGGFDGNFSWNRIGAEYTANVPVWNLRFLPALASALCISLAY
QIVVELKYSHFSAVIAALLIMFENALITQSRFMLLESVLIFFVLLAVMSYLKFYNRQRCS
FSMSWWFWLFLTGTACALAIGVKYMGLFTYLLLLAIAGVHTWQIIGDTTLSNVTVLYHVL
ARVCALLVLPVILYLGFFYIHLTLLYRSGPHDQIMTSTFQASLEGGLARITQGQPLEIAF
GSQITLRNVWSKPVPCWLHSHKNMYPIRYDSGRGSSHQQQVTCYPFKDVNNWWIVKDPGK
QELVVSNPPRPVRHGDIVQLVHGMTARFLNTHDVAAPMSPHWQEISCYVDYNVSMASQNL
WKVEIVNRDANNEVWKTILSEVKLLHVNTSAVLKLSGTALPDWGYRQLEIVGDKSSNVYH
QNMAWNVEEHRYGKSEEQKERELELQTPAQMDISKNTSFMAKFLELQLKMMMLKSEETEH
KYSSSPLEWINMDTNIAYWLHPSSNAQIQLIGNIVTWSSATVGILVYLVLFLWHLLRQHR
RVYTIPKDSWEHFVLAGAVCVGGWAVNYLPFFLMEKTLFLYHYLPGLTFKILLLPIVLEH
IHHDILRSSVSKNTFSAVVLAWISSVYFVYRTFSPLTYGYPALSASELTALRWKDSWDIL
IRKR
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atgccgggattgctgaaaatgccgattatcatcacagtgcacgttgatgtggttttaacc
attcttactgtcctgggaattgggaacagattatgggggctgatgtacccaaaagctgtt
gtgtttgacgaagtttattatggacaatttgtttccttgtacatgaagcaaatgtttttt
attgatgacagcggacctccacttggtcacatgattctggccgttggagcttattatggt
ggctttgatgggaacttttcttggaaccgaattggcgcagaatacaccgcgaatgtccct
gtttggaacctgagatttctcccagctcttgctagtgcactctgcatctcgctggcttat
cagattgtagttgagctcaagtattcacacttctctgctgttattgctgctcttctcatc
atgtttgaaaacgccttaataacccagtcacggtttatgctcctggagtccgtcctcatt
ttctttgtcttgttggcagttatgtcttatctgaaattctacaacaggcagagatgcagc
ttctcaatgagctggtggttttggcttttcctaaccgggactgcatgtgctcttgctatt
ggggtcaaatatatgggcttgttcacttacctgcttctattggctattgctggagtacat
acttggcagataattggggatacaacattatcaaatgtcacggtgctttatcatgttctg
gccagggtatgtgcacttttagtcctcccagtaattctgtatttgggattcttctacatc
cacctgaccttgttgtaccgctctggaccacatgaccaaataatgacaagcacattccaa
gccagtctggagggcggacttgcaaggatcacacagggtcaacctcttgaaatagccttc
ggttcccaaattacactgcggaatgtgtggagcaaacctgttccttgctggctgcattcc
cacaagaacatgtaccccatcaggtatgacagtggcagaggtagttctcaccagcagcaa
gtaacctgttatccttttaaggatgtgaacaactggtggattgtgaaggaccctggcaaa
caggagctggttgtcagcaacccccctcgcccagttcgccatggtgacattgtgcagctg
gttcatgggatgacagcacgtttcctcaacacgcatgatgttgcagcacctatgagccca
cactggcaggagatttcttgttacgttgattacaatgtctcaatggcgtcacagaaccta
tggaaagtggaaattgtcaatcgtgacgctaataatgaagtgtggaaaactattttatcg
gaagtgaagcttttgcatgtgaacacatctgcagttttaaagctcagtggtactgccttg
cctgattgggggtatcggcagttggagatcgttggagataaaagctcgaatgtttatcac
cagaacatggcatggaatgtcgaggaacaccgatacgggaaaagtgaggaacagaaggag
agagagctggagcttcaaaccccagcacagatggatatcagcaaaaacaccagctttatg
gctaaattcctggaattacaactgaagatgatgatgttgaagagcgaagagaccgaacac
aagtacagctcatcccctctagaatggataaacatggacaccaatattgcctactggctc
caccccagctctaacgcacagatacagctgattggaaatattgtgacgtggtcatcagca
actgttggaattcttgtttatttggtacttttcctttggcatctgctgaggcagcaccgg
agagtctacaccatcccgaaagattcctgggagcactttgttctggctggagctgtctgt
gttggaggatgggctgttaattatctgccttttttcttgatggagaaaacactttttctg
tatcattacctgccgggtctcaccttcaaaatcctcctgctgcccattgttcttgagcac
attcaccatgacatcctcaggtcttctgtgtccaaaaacaccttcagtgctgtggtccta
gcttggatctcctccgtctactttgtgtatcggacctttagccctctcacttatgggtat
ccagctctttcagcatctgagttaactgcgttgcgctggaaagacagctgggacattctc
atacgtaaacggtag
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