Scyliorhinus canicula (smaller spotted catshark): 119955496
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Entry
119955496 CDS
T11175
Symbol
psen1
Name
(RefSeq) presenilin-1 isoform X1
KO
K04505
presenilin 1 [EC:3.4.23.-]
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Pathway
scau04310
Wnt signaling pathway
scau04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
119955496 (psen1)
04330 Notch signaling pathway
119955496 (psen1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
scau01002
]
119955496 (psen1)
Peptidases and inhibitors [BR:
scau01002
]
Aspartic peptidases
Family A22: presenilin family
119955496 (psen1)
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GFIT
Motif
Pfam:
Presenilin
Motif
Other DBs
NCBI-GeneID:
119955496
NCBI-ProteinID:
XP_038637667
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Position
2:84916668..85014228
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AA seq
472 aa
AA seq
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MSELSAQVVPVFQGGQPRESASENRQANSSDLARRRLSDEEPCQESNGQSQSATRQTQEE
DEGDEEELTLKYGAKHVIMLFVPVTLCMVVVVATIKSVTFYTRNDGQLLYTPFTEDTDTI
GERAVNSILNALIMISVIVVMTLILVLLYKYRCYKVIHGWLIISSLLLLFFFSFIYLGEV
FKTYNVAMDYFTLALVIWNFGVVGMVCIHWKGPLRLQQAYLIMISALMALVFIKYLPEWT
AWLILAVISIYDLVAVLCPKGPLRILVETAQERNEPIFPALIYSSTMVWLVNMADIDPEA
RPGAPNDSDSKSADLALHQTCADNGETFVDDGVTHRDDGGFTQAWTNSRDARLGPMESTQ
ESRAVVQSLPSPPLAIEDPEERGVKLGLGDFIFYSVLVGKASAAASGDWNTTLACFVAIL
IGLCLTLLLLAIFKKALPALPISITFGLVFYFATDNLVRPFMDQLALYQFYI
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atgtcggaactatctgcccaggttgtgcctgtgtttcagggcgggcagccaagagagagt
gcatcagaaaaccgtcaagccaactcgtccgatcttgctcgcaggaggctgagtgatgag
gaaccttgtcaggagagcaatggccaatctcagagtgccacgcggcagacccaggaggag
gatgaaggggatgaggaagagctgactcttaaatatggggccaaacacgtaatcatgctc
tttgtgcctgtcaccttatgcatggtggtcgtagtagctaccatcaaatcggtcacattc
tacacacggaacgatggccagttgttgtacactccattcaccgaagacacagacaccatt
ggagagcgagctgtaaactccatattgaatgccctcattatgatcagtgtcattgttgta
atgacattaattcttgtccttctctacaagtacaggtgctacaaggtcattcacggatgg
ctaataatctcatcactcttgctgcttttctttttctcattcatctatttgggagaagtc
ttcaaaacctacaacgttgccatggattacttcacattggctttggtgatctggaacttt
ggagtggttgggatggtatgtatccactggaaggggccacttcgactccagcaggcctac
ctaatcatgatcagcgctttgatggctctggttttcatcaaatacctcccagaatggact
gcctggctaattctggctgtgatttcaatatatgatctggtagcggtcctatgccccaaa
ggcccgttgcgcattctagttgagactgctcaagagagaaatgaaccaatatttccagct
ctgatctattcctcgacaatggtatggttggttaacatggcagatattgacccagaagcc
aggccaggtgctccgaatgattcagattccaaatcggctgaccttgcccttcatcagaca
tgtgcagacaatggtgagacctttgtagatgatggcgtgacccatagagatgatggagga
ttcacccaagcgtggacaaacagcagagatgccaggttgggtcctatggaatcgacccag
gagagtcgagcagttgttcagtctttgccaagccctccacttgcaattgaagatccagag
gaaaggggtgtgaaacttggtttgggtgatttcatattctacagtgttcttgttggaaaa
gcatctgcagcagcaagtggagactggaatacgactctagcctgctttgtagcaatacta
attggtttgtgccttactctcctgctgcttgccatctttaagaaggctttaccagcactt
ccaatctccattacatttgggctagttttctactttgctacagataacctggtccgtccg
ttcatggatcaacttgctttatatcagttttacatttag
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