Scyliorhinus canicula (smaller spotted catshark): 119955514
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Entry
119955514 CDS
T11175
Symbol
rabepk
Name
(RefSeq) rab9 effector protein with kelch motifs isoform X1
KO
K20285
Rab9 effector protein with kelch motifs
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
scau04131
]
119955514 (rabepk)
Membrane trafficking [BR:
scau04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
119955514 (rabepk)
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Gene cluster
GFIT
Motif
Pfam:
Kelch_KLHDC2_KLHL20_DRC7
Kelch_3
Beta-prop_ATRN-LZTR1
Kelch_4
Kelch_5
Kelch_1
Kelch_6
Kelch_2
NANM
Motif
Other DBs
NCBI-GeneID:
119955514
NCBI-ProteinID:
XP_038637706
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Position
21:47943659..47977027
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AA seq
395 aa
AA seq
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MNYTLGSIKISQKVMELLTALEPGESPQKATWYALVPRGENPDVRVGHTLTYVPDTSEKG
TVIIVGGANPNGSFSDAHILNLDRHEWDVPEWKGLLPRYEHSSFVPVGRPGDLWLFGGAD
ESANRNCVQVLNFETGVWRSPAVNGTPPTPRTCHGSAAAIGDCLYVFGGGDKGAEPVQDI
QLHVFDKATLSWSQQSTEGKPPAPRHGHVMVAVGSKLFIHGGLAGKFFFNDMYFIDTVAA
NMRWKKVKMKGDIPGGCAAHSAFSHGKYIFIFGGMDATGALNTMYKYHVETNCWTLLEFD
SSLPPGRLDHAMCVIPWKIREYETSSPASNNGLSAKGNTKESNKQSGNDGNFTQRNCSVV
QNQTKNIVNLCLIFGGMDTQGEVYNDCFVTLINGY
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atgaattacaccttagggtccataaagatttctcaaaaggttatggaattgctaactgcc
ttggagccaggggaaagtccccaaaaagcaacatggtatgctcttgtaccaagaggggag
aatccagatgtccgagttggtcatactctcacatacgttccagatacctccgagaaaggg
acggtcattatagttggaggagcaaacccaaatggaagtttttctgatgcccacatctta
aatctggatagacatgagtgggatgtaccagagtggaaggggttactgccacgatatgag
cactccagctttgttccagtgggcagacctggcgacctttggctatttggtggtgcagat
gaatctgcaaacaggaactgtgtccaagttttaaactttgaaactggagtgtggagaagc
ccagcagtaaatggcactccaccaacaccccgaacatgtcatggatctgctgcagctatt
ggagattgcctctatgtttttggtggtggagacaagggagcagaacctgtacaagatata
caacttcatgtgtttgataaagccacacttagctggtcacagcagtcaacagaaggaaaa
ccaccagccccaagacatggccatgtgatggttgctgttggtagcaaattattcatccac
ggtggattagctgggaagtttttttttaatgatatgtatttcattgatacagttgcagct
aacatgagatggaaaaaagtaaaaatgaagggtgacatcccaggaggctgtgcagctcac
tctgcattttcccatggaaagtacatcttcatcttcggtggtatggatgccaccggagca
ttgaataccatgtacaagtatcatgttgaaacaaattgctggacactgttagaatttgat
tcctctctgccaccgggacgactggatcatgccatgtgtgttataccctggaaaataaga
gaatatgaaacttcatctcctgcatcaaacaatggtctatcagccaaggggaacacaaag
gaatctaataagcaaagtgggaatgatggaaatttcacgcaaaggaattgttcagtagtt
caaaatcaaacaaagaacattgtgaatctgtgtttgatatttggtggcatggacactcaa
ggggaagtttataatgactgttttgtcacactaataaatggctattga
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