Scyliorhinus canicula (smaller spotted catshark): 119955563
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Entry
119955563 CDS
T11175
Symbol
tsc1b
Name
(RefSeq) TSC complex subunit 1b isoform X1
KO
K07206
tuberous sclerosis 1
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Pathway
scau04140
Autophagy - animal
scau04150
mTOR signaling pathway
scau04218
Cellular senescence
scau04910
Insulin signaling pathway
scau05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
119955563 (tsc1b)
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
119955563 (tsc1b)
09143 Cell growth and death
04218 Cellular senescence
119955563 (tsc1b)
09150 Organismal Systems
09152 Endocrine system
04910 Insulin signaling pathway
119955563 (tsc1b)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
119955563 (tsc1b)
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Gene cluster
GFIT
Motif
Pfam:
Hamartin
Motif
Other DBs
NCBI-GeneID:
119955563
NCBI-ProteinID:
XP_038637801
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Position
21:complement(66875330..66935392)
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AA seq
1145 aa
AA seq
DB search
MTQPVNVSDLVSLLESTDLQVLEEVKGIIMDLLRSDRGPLLLNALVDHYLENNSILAVQI
LSAVQEPHDKHLLDRLNECMGKAATRLSAVTLLGHVIRREPTWIHKLFRTPVLVSLLKCL
KTETEIVVLTTGVLVLIILLPMIPQAGKQHLLDFFEIFGRLAAWNLRKPGQVPEVYLIHL
HASVYALFHRLYGMYPCNFVSYLRSHYSKKDNMETFEEVVKPMLEHVRIHPELVTGTKDH
ELDPIKWKRFETHDIVIECAKVSLDPKEASCEEAMQSCLNTSLHIHSISTLTTAPARSQI
LRAALAVHLLQPTHPGPPSLVSQGPSLGTRHHQPFNACLQMGSRTCSGAHLQPVGCRHLP
PPEDFLRARLTHPRVPLAYTGFTVHLDVKLESGKPLIKQRHVASDKGMDDSPCGLENENV
KTVSLKELSEVIKGLNLQDGMEKENEEAAIADELSEITPVDLQSLVTRGGFDSPFQHRTE
TLTGPQMKREQDLYSSATEQGMCLELQKALTTTCKVPDPHLQEQCPIKQGFMPIDKPGES
FSGSLIKQEALKAGSTTMEAFTPSPPLKVQALRHPPLSSGQPLPYEHFFELALPKTANLF
IKQKTSELQKVAREQLEDSLTQSCSSISPLDVLDKLIQHGGDAHVKELSRLCPVQPETQR
KMVGLPLPSKSADWTHFGGSVPMDELQRLRNQLILLHNQLLYERYKREQHAVRNRRLLRK
ILKATALEEQNLAMKDQLKLQELDIGSLKHSLFIEQNKYRLLREEKESIVKHLNNQIAEL
QKERGDYRASCQELQNKLQDCQKMIGELKLELQKANNKACNTAYLLNQMTEKFTSTQSVQ
KQMEWLNKQLLLLSEVNELHMEKLLHSQLGSAKAAETEMLQMSLVREREKMKHRIQQQVQ
RTEASQRRITELESQLTKKEHLFREQKKYLENVKNMASGELQAAESRYETQKGITQTLQC
EILELYSKLEQARPPEKLAAAEGTPRPMEDKSESIGAISDSFDQAPDVESKSRQAKPPMA
PGTSADQSANRKPQPAPTVTEAVGQGHGASSPNLLEQPTAPVTVGSYPSSKSLLGMRARE
LFRNKSESQCDNERPKMDSLFESLKTECSVELGSSLGPMKLQLPSPESVRQLSIMDYDGM
HHDQN
NT seq
3438 nt
NT seq
+upstream
nt +downstream
nt
atgacgcagccggtaaacgtcagcgacctggtttcgctgctggagtccacggacctgcag
gttctcgaggaagtgaaagggattatcatggacctcctgcgctcagaccgtggccccttg
ctgctgaacgcactggtggatcattacttggaaaataattctatattagctgtacagata
ctttcagctgtccaggaaccccatgataagcatcttttggaccgactaaatgagtgtatg
ggaaaagcagccacccgactatctgccgtgaccttactgggtcatgtaatccgacgtgag
ccaacttggattcataagctctttcgtacacctgtgctggtttcactactcaagtgtctg
aagacagaaactgagattgttgtgctcactactggagtccttgtgttaatcatcctcctg
ccaatgatcccacaagctgggaagcagcatcttctcgatttcttcgaaatctttggccgg
ttagctgcctggaacctgcgaaaaccaggccaagtgccagaagtatatctgattcaccta
catgccagtgtttatgcattatttcaccgcctctatgggatgtacccgtgcaattttgtc
tcctacctccgttcccattacagtaagaaagacaacatggaaacgtttgaggaggtggta
aagccgatgctggaacacgtgcgaatccaccccgagctagtgactggaaccaaggaccat
gaactggatcccattaagtggaagcgatttgaaactcatgacattgtcatagaatgtgcc
aaagtctccctggacccgaaggaggcatcatgcgaggaggctatgcagtcatgcctaaac
acttctctacacatacacagcataagcacactgaccacagctccagcccgttctcagatt
ctcagagcagctttggcagtacatcttcttcaacctacacaccccgggcccccatctcta
gtctcccagggacccagcctcggtacaagacaccaccaacctttcaacgcctgcctacag
atgggatccaggacatgctctggagcccatcttcagcctgtgggctgtcgacacctccct
cctcccgaggactttctccgagcccgtttgacacatcccagagtgcctcttgcatacaca
gggttcacagtacacctggatgttaaactggagagtggaaagcccttaatcaaacagcga
cacgtggcaagtgataaaggaatggatgacagcccgtgtgggttggagaatgagaatgtc
aaaaccgtatccttgaaagagctgtcggaggttataaaggggttgaatctacaggacgga
atggaaaaggaaaatgaagaagctgctattgctgatgaactttctgaaattacacctgtg
gatctacagtccctggttactcgaggaggattcgactccccatttcagcacaggactgaa
acactcactggccctcagatgaaacgtgagcaggacttgtattcttcagccactgagcag
ggaatgtgcctcgagctccagaaagccctaactacaacttgcaaagtgccagaccctcac
ttgcaagagcagtgtcccatcaaacaggggttcatgcccatcgacaagccaggtgaaagt
ttttctggaagcctaatcaagcaggaggcactcaaagcagggtcgacgacaatggaagct
tttacaccgagccccccgttaaaggtccaggcactgaggcaccctccacttagtagtggt
cagcccctcccatacgaacacttttttgaactggccttgccaaagacggcgaatctcttc
atcaagcagaagacctctgagctccaaaaggtagcgagagagcaattggaagattcattg
acccagtcgtgttcatcgatctcgccccttgacgtgctagacaagctcattcagcatgga
ggggatgcacatgtgaaggagcttagcagactttgtcctgtgcagcccgagactcaaagg
aaaatggtcggattgccgttgcccagcaaatctgcagactggacacactttggaggttct
gtacccatggatgagctacaacggcttcgcaatcaactcattttactgcacaaccagcta
ctctacgaacgttacaagcgagaacagcatgctgttcggaatagacggctgctacgcaaa
attctcaaagcaactgcattggaggaacaaaatttagctatgaaggaccagctgaagctt
caggaattggacatcggatcgctcaagcatagtttattcatcgagcagaacaagtatcga
cttctgcgggaagagaaggaatccatcgtcaagcatctcaacaaccagattgcagagctg
cagaaggagcgaggtgactatcgtgccagctgtcaggagctccagaacaaactgcaggat
tgccaaaagatgatcggagaattgaagttggagctacagaaggccaataacaaagcatgt
aacacagcatatctgcttaaccagatgactgagaagtttaccagcacgcagtctgtccag
aagcaaatggaatggctgaacaagcagctactgctcctgagtgaagtgaatgagctacat
atggagaagctgctacactctcagctgggctccgctaaggcagcggagaccgagatgttg
cagatgtccttagtccgagagagagagaaaatgaaacaccgcatccagcagcaagtgcag
aggacagaggcatcgcagcgacgcataaccgagctggaaagccagctgactaagaaagag
cacctttttcgcgagcaaaagaaatatctggagaacgtcaagaacatggcgagtggggag
ctgcaggcagcagaaagccgctatgaaacccagaaagggataacgcaaactctacagtgt
gaaatcctggaactctacagcaagttggagcaggcacgacctccagagaaactagcagca
gcagaaggaacacctcggcctatggaggataagtctgaaagcattggtgccatttctgac
tcattcgaccaggccccagacgtggagagcaaaagccgccaagccaagcctcccatggcc
cccggcacctcggctgaccagtccgccaatagaaagccgcagccagcaccgacggtcacc
gaggcggtgggtcaaggccacggcgcctccagcccgaacctcctggagcagcccaccgcc
ccggtcacggtcggctcctaccccagctccaagagcctcctgggcatgcgggcccgcgag
ctgttcaggaacaagagcgagagccagtgtgacaacgagcggcccaagatggacagcctc
tttgaatcccttaaaaccgagtgcagcgtggagctgggcagctcactcgggcccatgaaa
ctacagctgcccagtccggagagcgtcaggcagctcagcataatggactacgacgggatg
catcatgaccagaattaa
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integrated database retrieval system
