Scyliorhinus canicula (smaller spotted catshark): 119955595
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Entry
119955595 CDS
T11175
Name
(RefSeq) LOW QUALITY PROTEIN: complement C5-like
KO
K03994
complement component 5
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Pathway
scau04080
Neuroactive ligand-receptor interaction
scau04810
Regulation of actin cytoskeleton
scau05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
119955595
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
119955595
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
119955595
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
scau01002
]
119955595
Peptidases and inhibitors [BR:
scau01002
]
Peptidase inhibitors
Family I39: alpha2M family
119955595
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TED_complement
A2M_BRD
A2M
MG1
C5_CUB
A2M_recep
NTR
MG2
MG4
ANATO
MG3
Motif
Other DBs
NCBI-GeneID:
119955595
NCBI-ProteinID:
XP_038637876
LinkDB
All DBs
Position
21:complement(54329641..54523074)
Genome browser
AA seq
1698 aa
AA seq
DB search
MKLLFIISFVALFQSSKGHEHTYLVTAPKIFRVGAAETVVIQTYGYTNSLRISITLRSYP
DRAKIFAEGQVTINEENGYQESLSFTILPKDLPRKKNEKQFVYLKVLSSEFVQEEAVPVS
YQNGLLFVQTDKPVYTPDQSVKFRIYSLNEELKPARRPVAITFKDPEEVKVDYAEYEDVT
GIIPVPDFKIPSNPKYGLWKIEALYKNDFSTSTSTQFEVKEYVLPTFQISIEPEKHYISF
QEFERFTITVKASYFYKKRIRSGYVLVRFAILEKDGLKQLLPHAAQTVMMSHGEATIEFN
AQAATEVIQRASIEDLHGANLYIGVTVQDSSADISEDAEYTGVRFTESPYTINLVATPLF
IKPNLPYYIRAQVKIFXGYPKGNTAVTLSAEAVFXRWYTEQIAGDLSRRKQTRKDDGTVL
FVINIPADIQQLKFEIKSALDSQYPISKSYTAEAYQSVSKSYLYITWTGGYHKYRVGDYF
NVNLAASSPYLNKIKHFHYQVVSKGKIILFETKNRPVGNQIFSLNIPITPEMIPSARLIA
YYVVIGENRAELVVDSLWFEVEGKCVNNQQIVLRTDSNVYKPGSQMALSITAKPNSLVAL
SSIDTAVYSIRTGSKIEIQKVLLDAEKHDLGCGAGAGRNNADVFKRAGVMFLTNANVKAL
PVTDTKCDAILRPKRDLKLMAEIRNKIARFTNPIERMCCMDGMKIYPLRHSCTERASRIK
LPDPCRKLFLECCNYAQKLRLKSESDLTLGRMELNNEFEMEPPHIRSYFPESWLWEVHEI
QESSGTQPLLKTLPDSLTTWEVQGVGISNSGICVADPIKVIVYQDFILKAKLPYSVVRGE
QVQLRASVYNYWKDKSGVCVQISTEEGTCLFKGSQTSIEGKQRSTCQRKTLEGFSALPFT
FTVLPLKIGVHSINFTLNIQNSASEIIVHKLNVVPEGIKKEKNLGYVLDPANILGIMVRR
IEIRLKRPLNILPNVEPKNTLTVQGDLIGETMSIALNPEGVHKLTNLPSGSAESALMSVA
PIYYIYKYLEKTNSWNVMGPNSFKIQLSMKQQMKDGITSIMSFRTKNGNSYSIWKDQEGS
TWLTAFVLRVFAQVSEYLTIDEASICSTITWLVSQCQNSDGSFREHSNYVPVRFQVKKDE
IKERTLYLTAFTSIAIQKAFNLCPTQGISRAILKADEYLSNNLESVKSTLVLAVTAYALS
LKNRNSRFSFLALDKLKDEAFVIGNPPSHRFWKDISERSASSTEVTARIVETTSYALLTV
LLSTDKRYGNPIVKWLTEQQRYGGGFLSTQDTVTALEGLTEYATSMKRTRLDMSISIDYR
RLGKIKQFELNEQNSFSRPVEIEKNDNVIVKTSGRTGTATVNMRSVFYVIGTSSETCDFS
LTINVAKTISDTYPPGVEKVYRLEACAKYKPRSEDSVLKSEHSVMEITLGTGLIPEEEDL
KILSNAVDQLIPHYRITEKGVILQIYQIPSDNFFCVGFRVYEMMKVGMITSVPFTVYSYH
SPDRQCTILYNPTGDEKLLKLCNGDECKCMKAECSEIRPPLDISLNSQEKRKAACNKGPA
YAYKVQILSSEEQDNFIKYNATVXEVFMKVDDVEKASIISLIKKDTCSDVSLIKSQRYLI
MGKNSLHSSRQSVYEYPLDSSNWIERWPXTGDCSGDACGTFLQQMEDLSMGLLISKCYWI
ELERCLNLKYYFLCYFHT
NT seq
5097 nt
NT seq
+upstream
nt +downstream
nt
atgaaacttcttttcattattagttttgtggctctgtttcaaagcagtaaagggcatgaa
cacacgtaccttgttacagcacctaagatctttagagtgggagcagctgagactgtggtg
attcaaacatatggatatacaaattcattacgtatttcaattactctaagaagctaccca
gatagggcaaagatctttgcagaagggcaagttacaataaatgaagaaaatggatatcaa
gaatctttgagtttcactatcttgccaaaagatttacccagaaaaaaaaacgaaaaacag
tttgtgtacttaaaagtactctcttcagaatttgttcaagaggaagcagtgccagtatct
taccagaatggattgctctttgtccagacagacaaacctgtttatactcctgatcagtca
gtgaaattccgaatttattctctgaatgaagaactcaaaccagccagaagaccagttgct
attacttttaaggatccagaggaagtaaaagtggactatgctgaatatgaagatgtcact
ggaataattccagtacctgacttcaagattccatctaaccccaaatatgggttgtggaaa
atagaagctttatacaaaaatgacttctcaacatctacttcaacacagtttgaggtcaaa
gaatatgtgttgcctacctttcaaatctctatcgagccagaaaaacactacatttccttt
caagaatttgaaagatttaccataactgtaaaagcaagctacttttataaaaaaagaata
agatcaggatatgttttagttcgttttgcaattttggaaaaagatggtttgaaacaacta
ctaccacatgcagcacaaacagtaatgatgtcacatggagaagcaactatagagtttaat
gcgcaagctgcaactgaagtaatacagcgagctagtattgaagatcttcatggagctaat
ttgtacattggagtaacagttcaagattcctcagctgacatatctgaagatgctgaatac
actggagttagatttacagaatcaccatatacgattaatttggtagctactccactcttc
ataaaacccaacctgccatactacatcagagcccaagtaaagatattttagggatatcca
aaaggaaataccgcagttaccctttctgcagaagcagttttttgaaggtggtacacggaa
cagattgcaggagatttgagcagaagaaagcagaccagaaaagacgatggaacagtattg
ttcgtcatcaatattccagctgatattcaacagttaaaatttgagattaaatcagctctt
gacagtcaatatcccatctccaaatcgtacacagcagaagcttatcaatcagtttctaaa
agctacctctacattacttggacaggaggttaccacaaataccgtgtgggggattatttt
aacgtgaatcttgccgcaagtagtccctacttgaacaaaataaagcacttccactatcag
gttgtatcaaaaggaaaaataattttatttgagaccaaaaaccgtccagttggcaaccag
attttcagtctgaacattcccattacgccagaaatgattccttctgctcgcctgattgca
tattatgtggtaattggagaaaacagagctgaactggttgttgattctctgtggttcgaa
gtggaagggaagtgtgtaaacaatcaacagattgtattgagaacagattcaaatgtatac
aagccaggaagccaaatggctttaagtattactgcgaaaccaaattcacttgttgcatta
tcttccatcgacactgctgtgtattcaataagaacaggaagcaagattgaaattcaaaaa
gtacttctcgatgccgaaaagcacgatcttggatgcggtgctggagcggggagaaataat
gctgatgtgttcaagagagctggagtgatgtttttgaccaatgccaatgttaaagctttg
ccagttactgatacaaaatgtgatgctattttgcgaccgaagcgagatttgaaactgatg
gctgaaatacggaataaaattgccagatttacaaacccaattgaacggatgtgttgtatg
gatggaatgaaaatctatcctctccgacattcgtgcactgaacgagcgagtagaatcaag
ttacctgatccatgtaggaagctatttttagaatgctgcaattatgcacaaaagttacga
ttgaagtctgaaagtgacctgacattggggcgaatggaattgaacaatgaatttgaaatg
gagccaccccacatccggagttattttccagaaagctggttatgggaggtccacgaaatt
caagagagctcaggtactcaaccactgttaaaaacattgcctgattcactaactacttgg
gaagtccaaggagttggaatttctaattctggtatatgtgttgctgacccaataaaggtg
atagtttatcaagattttattctaaaagcaaaactaccttattctgtcgtgcgaggtgaa
caagtgcaactaagagcttctgtgtataattattggaaggacaaaagtggggtctgtgta
caaataagtacagaagagggaacgtgtttattcaaaggttctcaaacaagcattgaagga
aaacagcgttctacttgccaaagaaaaaccttggaaggtttctcagcacttccatttaca
ttcactgtacttcctctgaaaataggtgtccacagcataaatttcacactgaacattcaa
aattcagcatcagaaattattgtccacaaattgaatgtagtgccagaaggtattaagaaa
gagaaaaatttggggtacgtattggatccagccaacatcttgggcataatggtgagaagg
attgaaattcgactgaaaagaccattaaatattctcccaaacgtagaaccgaagaatacg
ttaactgtgcaaggtgatttaattggtgaaacgatgtccatagctttaaaccctgaagga
gttcacaagctaactaacctacctagtggctctgctgaatcagcgctaatgagtgttgca
ccaatttactacatctataagtatctggagaaaaccaatagttggaatgtgatggggcca
aacagcttcaagattcaactgagcatgaagcaacaaatgaaagatggcattacaagtatt
atgtccttccgtaccaaaaatggcaattcatatagcatatggaaggatcaagaaggcagc
acttggttaacagcctttgtcttaagggtttttgcacaagtcagtgagtatctaacaatc
gacgaagcatcaatttgtagtacaatcacttggcttgtctctcaatgtcaaaattctgat
ggatcatttagagagcattccaattatgtaccagtccgatttcaggttaaaaaggatgaa
attaaagaaagaacattgtatttgacagcatttacaagtattgccattcaaaaggctttt
aacttgtgcccaactcagggaattagcagagctatacttaaagctgatgaatatttgtca
aacaatttggagagtgtgaagagtacacttgtattagcagtaactgcctacgcactgtca
ttgaaaaacagaaactctcgcttttcttttctggctttggacaaactgaaggacgaagct
tttgtaatagggaatcccccgtcacatcgattctggaaagacatttccgaaagatcagct
tcttcaactgaagtaacggcacgcatagtagaaacaacatcgtatgcacttctgactgtg
ttactctccactgataaaagatatggaaaccccatagttaaatggctcactgaacaacag
cgctacggtggaggctttctttcaacacaagacactgtaacagcccttgaaggtctcaca
gagtatgccactagtatgaagcggaccagacttgatatgtcaatatcaattgactacaga
agacttggcaaaattaagcagtttgaattgaatgaacaaaattcattttcaagaccagtg
gagattgagaaaaatgacaatgtaattgtaaaaacatctggcaggactggcacagctact
gttaatatgaggagtgtcttttatgtcatcggcacatccagtgaaacgtgtgatttctct
ctaacaataaatgtcgcaaaaacaatatcagatacatatcctccaggagttgaaaaggtt
taccgcctagaagcttgtgcaaaatataaacctaggtccgaagactctgtattgaaatca
gaacattcagtgatggagataacattgggcacaggcttgatcccggaagaggaagattta
aaaatactatcaaatgcagttgatcaattgattcctcactacagaataacagaaaaaggt
gtcattcttcaaatatatcaaattccatcagacaactttttctgtgttggcttccgtgtt
tatgaaatgatgaaagttggaatgataacttcagttcctttcacagtctatagctatcat
tcaccagacagacaatgcactatcctttacaatccaactggagatgaaaagcttttaaag
ctctgcaatggagatgaatgtaaatgtatgaaagctgagtgcagtgaaatacggccaccg
ttagatatatctctcaatagccaggaaaaacgcaaagctgcatgcaataaagggccagct
tacgcctacaaagtgcaaattttgtcttctgaggagcaggataatttcattaagtacaac
gccacagtcntggaggtatttatgaaagttgatgatgttgaaaaagcctcaattataagt
ttgattaagaaggacacttgttctgatgttagtttaatcaaaagccaaaggtacttgata
atgggaaaaaatagcctgcattcatcaaggcaatctgtgtatgaataccctttggactca
tccaactggatagaaaggtggcctnttacaggagactgttctggagatgcatgtggaacc
ttcctccagcaaatggaggacttgtcaatgggtcttttaataagtaaatgttattggata
gagctggagagatgtttgaatctaaaatattacttcttatgttactttcatacctga
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