KEGG   Scyliorhinus canicula (smaller spotted catshark): 119955617
Entry
119955617         CDS       T11175                                 
Symbol
cdk9
Name
(RefSeq) cyclin-dependent kinase 9
  KO
K02211  cyclin-dependent kinase 9 [EC:2.7.11.22 2.7.11.23]
Organism
scau  Scyliorhinus canicula (smaller spotted catshark)
Pathway
scau03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:scau00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    119955617 (cdk9)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01001 Protein kinases [BR:scau01001]
    119955617 (cdk9)
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:scau03021]
    119955617 (cdk9)
Enzymes [BR:scau01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.11  Protein-serine/threonine kinases
    2.7.11.22  cyclin-dependent kinase
     119955617 (cdk9)
    2.7.11.23  [RNA-polymerase]-subunit kinase
     119955617 (cdk9)
Protein kinases [BR:scau01001]
 Serine/threonine kinases: CMGC group
  CDK family
   119955617 (cdk9)
Transcription machinery [BR:scau03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Super elongation complex (SEC)
     119955617 (cdk9)
    Brd4/P-TEFb complex
     119955617 (cdk9)
    7SK RNP complex
     119955617 (cdk9)
SSDB
Motif
Pfam: Pkinase PK_Tyr_Ser-Thr Haspin_kinase ABC1 RIO1
Other DBs
NCBI-GeneID: 119955617
NCBI-ProteinID: XP_038637944
LinkDB
Position
21:complement(57556670..57581082)
AA seq 389 aa
MMARCPDGGMSVRLSADMIKHYEALDFQFCDEVGKYEKLAKIGQGTFGEVFKARHRQTGK
KVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATQYNRYKGSIYLVF
DFCEHDLAGLLSNANVKFTLAEIKKVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVL
KLADFGLARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMW
TRSPIMQGNTEQHQLTLISQLCGSITAEVWPNVEKYELYQKLELPKGQKRKVKDRLKAYV
KDPYALDLIDKLLVLDPTQRIDSDDALNHDFFWTDPMPSDLKNMLSTHNQSMFEYLAPPR
RRASHMPQQSTTQNKNPAAANQTEFDRVF
NT seq 1170 nt   +upstreamnt  +downstreamnt
atgatggcgcggtgcccggatggcggtatgagtgtccgtctcagcgctgacatgatcaaa
cattatgaagcgctggatttccagttctgcgacgaggtcgggaagtacgagaagctggcg
aagatcggacagggcaccttcggggaggtttttaaagcacgtcatcgacagacggggaag
aaagtggctttgaagaaagtcctgatggaaaatgaaaaggaagggtttcccatcacggcc
ctgagagagataaaaatcctacaactgctgaagcacgaaaacgtggtgaatctcattgag
atctgccgcactaaagccacgcagtataaccgctacaagggcagcatctacctggtattt
gacttctgtgagcatgaccttgctggactgctcagcaacgccaacgtgaagttcacattg
gcagaaatcaagaaggtgatgcagatgttactgaacgggctctactacattcatcggaac
aagatcttgcatcgggatatgaaagcagctaacgtccttatcactcgggatggtgtgctg
aaactggctgactttggtctagctcgagcatttagcctggccaagaatagccaaccaaac
cgctataccaacagggttgtgacactgtggtaccgtccgccggagctcctgctaggtgag
cgagattatggaccacccatagatttgtggggagctgggtgcatcatggctgaaatgtgg
actcggagccctataatgcagggtaacacagaacaacatcagttaaccctgatcagtcaa
ctctgtggctccatcacagcggaggtttggcctaatgttgaaaagtatgaactctaccaa
aaactggaattgcccaaaggtcagaagcgtaaggtcaaagaccggctgaaggcttatgtg
aaagacccttacgcgctggacctgattgacaagctgcttgtccttgaccccacccagagg
attgacagtgatgatgcgctgaaccacgatttcttctggactgaccccatgccttctgac
ttgaaaaatatgctctcaacgcacaaccagtcaatgtttgaatacttggctcctcccagg
aggcgagctagtcacatgcctcagcagtcaaccactcagaacaagaatcccgctgccgcc
aaccagactgagtttgatcgagtgttctga

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