KEGG   Scyliorhinus canicula (smaller spotted catshark): 119955681
Entry
119955681         CDS       T11175                                 
Name
(RefSeq) tubulin alpha chain-like
  KO
K07374  tubulin alpha
Organism
scau  Scyliorhinus canicula (smaller spotted catshark)
Pathway
scau04145  Phagosome
scau04210  Apoptosis
scau04517  IgSF CAM signaling
scau04530  Tight junction
scau04540  Gap junction
scau04814  Motor proteins
scau05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:scau00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04517 IgSF CAM signaling
    119955681
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    119955681
  09143 Cell growth and death
   04210 Apoptosis
    119955681
  09144 Cellular community - eukaryotes
   04530 Tight junction
    119955681
   04540 Gap junction
    119955681
  09142 Cell motility
   04814 Motor proteins
    119955681
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    119955681
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:scau03019]
    119955681
   03036 Chromosome and associated proteins [BR:scau03036]
    119955681
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:scau04812]
    119955681
   04147 Exosome [BR:scau04147]
    119955681
Messenger RNA biogenesis [BR:scau03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     119955681
Chromosome and associated proteins [BR:scau03036]
 Eukaryotic type
  Centrosome formation proteins
   Microtubules and associated factors
    Other tubulins
     119955681
Cytoskeleton proteins [BR:scau04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulins
    119955681
Exosome [BR:scau04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   119955681
  Exosomal proteins of other body fluids (saliva and urine)
   119955681
  Exosomal proteins of colorectal cancer cells
   119955681
SSDB
Motif
Pfam: Tubulin Tubulin_C DUF7281 Tubulin_3
Other DBs
NCBI-GeneID: 119955681
NCBI-ProteinID: XP_038638049
LinkDB
Position
21:11500451..11504746
AA seq 450 aa
MRECLSLHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK
HIPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHCSVGKEIVDLVLD
RVRKVADLCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKAKLEFSVYPAPQISTA
VVEPYNSVLVTHCTLEHSDCAFMVDNEAIYDVCRRNLDIERPTYTNLNRLIGQVVSSITA
SLRFDGALNVDLTEFQTNLVPYPRIHFPLATFAPLISAEKAYHEQLSVSELTNSCFEPAN
QMVKCDPRQGKYMACCMLYRGDVVPKDVNAAIATIKTKRSIAFVDWCPTGFKVGINYQPP
TVVPGGDLAKVQRALCMLSNTTAISLAWTRLNLKFDKMYAKRAFVHWYVGEGLEEGEFQD
AREDMASLEKDYEEVGVDSSSLDRKGEEEE
NT seq 1353 nt   +upstreamnt  +downstreamnt
atgcgtgagtgcctttcactccacattggccaggctggtgtacagatcgggaatgcttgc
tgggagctgtattgtctggagcatggcatccagccggatgggcagatgcccagtgacaag
accatcggaggaggtgacgattccttcaacaccttcttcagtgagacaggggcggggaaa
cacattccccgggccgtgttcgtagatctggagcccaccgtgattgatgaggtccggacc
ggcacctaccgacagctctttcacccggagcagctcatcaccggtaaggaggatgcggcg
aataactatgcccggggccattgctcggtgggcaaggagattgtggacctggtcctggat
cgtgtccggaaggtggctgatctctgcacagggttacagggtttcctcatcttccacagt
tttgggggtggtactggctcaggttttacttccctcctgatggagagactctccgtcgac
tacggcaagaaagccaagctggaattttccgtttaccccgctccccagatttccaccgcg
gtggttgagccgtataactctgtgctggtcacccactgcaccctcgagcactctgactgt
gccttcatggtggacaatgaggccatttacgatgtctgtcggcggaaccttgacattgag
agaccgacttacacaaacctcaaccgtctcattggacaggtagtgtcatccatcacggcc
tcactccggttcgatggtgccctcaacgtggacctgactgagtttcaaaccaacctggtc
ccctatccccgcattcacttccctctggcgacctttgcccctcttatatcggctgagaaa
gcttaccacgagcaactctcggtgtcggagctcaccaattcatgttttgaaccagccaac
cagatggtgaagtgtgacccccgccaaggcaagtacatggcctgctgcatgctgtaccgg
ggagacgttgtgccgaaggatgtcaacgccgccatcgccaccatcaagaccaagcgctcg
atcgcctttgttgattggtgtcccactggcttcaaggttggcatcaactaccagcccccg
acggtggtgccagggggtgatctggcaaaggtacaacgggccctctgtatgctgagcaac
accaccgcaatttccttggcttggacccgactgaatctcaaattcgataagatgtacgcc
aagcgggcctttgtccattggtatgtgggggaggggctggaggaaggggagttccaggat
gcacgagaggacatggcttcactcgagaaggattatgaagaagtgggagttgattcttcc
tcactggacagaaagggcgaagaggaagaataa

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