Scyliorhinus canicula (smaller spotted catshark): 119955755
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Entry
119955755 CDS
T11175
Symbol
apex2
Name
(RefSeq) DNA-(apurinic or apyrimidinic site) lyase 2
KO
K10772
AP endonuclease 2 [EC:
3.1.11.2
]
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
scau03400
]
119955755 (apex2)
Enzymes [BR:
scau01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
119955755 (apex2)
DNA repair and recombination proteins [BR:
scau03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
119955755 (apex2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Zn_ribbon_GRF
Exo_endo_phos_2
Motif
Other DBs
NCBI-GeneID:
119955755
NCBI-ProteinID:
XP_038638211
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All DBs
Position
21:174148..186922
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AA seq
505 aa
AA seq
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WRITNAVPLFKKGSRDNPGVATFCRDSAVPLSAEEGLSGILANQSGTPAWCTLGGFSDEE
LKALDGEGRAVITKHRIRRCEQAEEILTVINVYCPRADPDREDRSHFKLRFYQLLQARAQ
ALLQDGGNVIVLGDMNTAHTPIDHCQPGDPECFARHPDRVWMNGFLCSSSGLLQSDEVSP
ESDPEPGLGTRRASGHGLFVDAFRLFHPTEREAYTCWRTSSGARKTNYGTRIDYIFVNKS
LAETELQDCILMPEVEGSDHCPVKAFLKASCVSAGKCPPLCTKYLPEFAGFQQKLPQFLV
NVQNKQISSELRNYPQLEQNSQSLVDLQRKKAKLDRPRSGKGSLSEKGRSSRSKPGHTGT
LLRFFKPASALGTHDDLGRPHLTPLSVPHHQQAQAEGGKEDTPAQTQQNKSGAAFWKSLL
KGLPPPPNCSGHQEPCLLRTVRKPGPSQGRQFYICAHPEGSVSNPASRCNFFRWANTGSK
RDGSIAKPTASLQEGGTQRLEDGRE
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
tggaggataacaaatgctgtccccttgttcaagaaggggagtagagataaccccggtgtt
gctaccttttgtagagacagcgccgtgccactctctgctgaggaaggtctgtctgggatc
ctggccaatcagagtggaacgcctgcttggtgcaccctgggagggttttcagatgaggag
ttgaaggctttggacggtgaaggtcgagctgtgatcacaaagcaccggatcagaaggtgt
gagcaggcggaggagatactgacggtgattaacgtgtactgtccgcgtgccgatcctgac
agagaggaccgcagtcatttcaaacttcgcttctatcagctgttacaggcgagggcacag
gctctgctgcaggatggaggaaatgtgattgttctgggagacatgaacactgcacatacg
cccatcgatcactgtcaaccaggtgacccggaatgttttgccaggcacccagaccgtgtg
tggatgaacgggttcctgtgcagctcctctggcctgttgcagtcagatgaggtgagtcca
gaatctgatccggagcctggactgggaacgagacgggcaagtggccatggcctctttgtg
gacgccttccgactattccatccaacggaaagagaagcttacacctgctggagaacaagc
tcgggagctcgcaaaacaaactatgggacaaggattgattacatctttgttaataaatct
ctggcagaaactgagctgcaagactgtatcctgatgccagaggtggaagggtcagatcat
tgtccagtcaaagcctttctaaaggcctcctgtgtgtcagcaggtaaatgtccgccgctt
tgtaccaaatacctgccagaattcgctggcttccagcagaaacttccccaattcctggtt
aatgttcagaataaacaaatcagttctgagctgcggaattatccccaacttgagcagaat
tcgcaatcactggtcgatctccaaagaaagaaagctaaactggatagaccgcggagtggg
aaaggatcactgagcgaaaaggggaggagcagcagaagtaagcctggccacacgggcacc
ttgctgcggtttttcaagccagcttcagcattggggacacatgatgacctggggcgccct
cacctgacccctctgtctgtccctcatcaccagcaagcccaggccgagggcggtaaagag
gacactccggcacagacgcagcagaataagtcgggagctgccttttggaagtcattgttg
aaaggtctgcctcctcccccaaactgttcggggcaccaggagccgtgtctgctgcgcacg
gtcaggaagcctgggccgagccagggcaggcagttctatatctgtgcgcaccctgagggc
tctgtgtcaaacccagcctcacgatgcaacttcttccgctgggcaaacacgggcagtaaa
agggatggcagcattgccaaaccaactgccagcctccaggagggaggaacacagaggctg
gaggacgggagggagtga
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