Scyliorhinus canicula (smaller spotted catshark): 119955781
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Entry
119955781 CDS
T11175
Name
(RefSeq) histone deacetylase 6-like
KO
K11407
histone deacetylase 6 [EC:
3.5.1.98
]
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
scau01009
]
119955781
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
scau03019
]
119955781
04131 Membrane trafficking [BR:
scau04131
]
119955781
03036 Chromosome and associated proteins [BR:
scau03036
]
119955781
Enzymes [BR:
scau01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
119955781
Protein phosphatases and associated proteins [BR:
scau01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
119955781
Messenger RNA biogenesis [BR:
scau03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
119955781
Membrane trafficking [BR:
scau04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
119955781
Chromosome and associated proteins [BR:
scau03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
119955781
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
119955781
NCBI-ProteinID:
XP_038638267
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All DBs
Position
21:3476262..3550528
Genome browser
AA seq
809 aa
AA seq
DB search
MESISAVISVHRKYWKCLQNRELSSWRDVQAFPEASELTDDVDEMLDIIMMEVMRPLPPY
QTGLLYDERMKDHFNMWDFQHPEQPRRISQIFARHEELHLVERCYPILAHPANESQVEMC
HSLTYITSLKSTKEMNSRELHRQSCEYNSIFISPQTYDSALLAVGSLFNVVDAVLTGQVQ
NGVALIRPPGHHAERDVACGFCFFNNVALAARFAQNLVGHKIKVLILDWDIHHGNGTQHI
FEDDPSVLYISIHRYDNGSFFPNSEDADYTKVGINAGEGFNVNIPWNGSNMGDAEYMTAF
HRLVMPISYQFQPDLVLVSAGFDAAQGDPLGGCRVTPECYAHLTHMLLGLAGGRVVLALE
GGYNLTAISESMAMCTRTLLGDTPPYLQPANPLLASAAEAISNVVSVHHKHWSCLRLLAP
ELELQNKSKGRTWAQQPASSTAPAPEPRVPVSQSRRTSMWLQQQVPMINFPEDDPQVSQS
RRASAWSQQQISFTLPDLDFDSRESESRRNSLWQHYSQEDETLAAGTTKRRVSLWSQQVP
PTHNAELDDTGHPIQTGMKSLWPPEPLASPMAILPKEQKGKPGSPAFGLTVPTSPDPSSG
KVTSPSSMTGARPRVKVDTQHGKDLQEEDDDDALSPDDWKDKLSLDVGKSSSRETSRSTS
STVKQKVSSDDNIASSATRRCPEPDVPLPPSTISLGELHAVTPMKWCPHLGIVRPLPSAG
LNVSEPCSVCGSEDENWVCLSCYKVFCGRYVNEHMMIHGLKNEHYMVLSYTDLSAWCYGC
DSYVHNEVLLPSKEEAHRKKFGEELHTGA
NT seq
2430 nt
NT seq
+upstream
nt +downstream
nt
atggagtcgatctctgctgtgatctccgtccacaggaaatactggaagtgccttcagaac
cgcgagttgagctcgtggcgcgacgttcaggccttccccgaggcgagcgagctgaccgat
gacgtggatgagatgctggacatcatcatgatggaggtgatgagacctctgcccccttac
caaactgggctgctgtatgacgagcgaatgaaggaccacttcaacatgtgggactttcaa
cacccggagcagcctcggcgaatctcacagatatttgcccgtcacgaggaactgcacctg
gtggaaaggtgctatccaattcttgctcatccagccaacgagagtcaagtagagatgtgt
cacagcttaacctacatcacgtcactgaagtccacaaaggagatgaattcccgggagttg
catcggcaatcgtgtgagtacaactccatcttcatctcgcctcagacctacgacagcgcg
ctgctagcggtgggctccctctttaacgtggtggatgccgtgctgacaggacaggtccag
aacggagttgcgctcattcgtcccccaggccaccacgcggagagggacgtggcttgtgga
ttctgtttcttcaacaacgtggccctggctgctcgtttcgcccagaacctggtcggccac
aaaataaaggtgctgattctcgactgggacatccaccatggaaacggaacacagcacata
ttcgaagatgacccaagcgtcctctacatctcgatccaccgttatgacaatggctcgttc
ttccccaactcggaagacgccgactacaccaaggttggcatcaacgctggcgagggtttc
aacgtcaacatcccgtggaacggaagcaacatgggcgacgcggaatacatgaccgccttt
caccggttggtcatgcctatctcctaccagtttcaaccagacttagtgctggtctcggct
ggctttgatgcggctcaaggtgatccgctgggtggctgtagagtgactcctgaatgctac
gctcacctcacacacatgttgctgggcctggcagggggcagggtcgtcctggcactggag
ggcggttacaatctaactgcaatctccgagtctatggccatgtgcactcgaaccttactg
ggcgacaccccgccctatctccagccggcaaacccgctccttgccagtgcagccgaggcc
atcagcaacgtggtctcagtccatcacaagcactggtcctgccttcgacttctggctcca
gaactggaacttcaaaataagtccaaggggcggacatgggcccagcagccagcttcctcc
acggctcccgctccagaaccccgcgttccggtttcgcaaagccggagaacatcaatgtgg
ctacagcagcaggttcccatgattaactttccggaggatgacccgcaggtgtcgcagagc
cggagagcatcggcctggtcccagcagcaaatttccttcacacttcctgacctggatttt
gacagtcgcgagtcagagtcgcggagaaattcgctgtggcagcactactcacaggaggat
gagacacttgctgcaggtactacaaaacggagagtgtccctgtggtcgcagcaggtcccg
cccacccacaatgccgagctggacgacaccggtcatcccattcagaccggtatgaagtca
ctgtggcctccggagccacttgcctcgcccatggccatcctgcccaaggagcagaagggc
aagccgggcagccctgcctttggactgaccgttccaacctccccggatccctcctctggc
aaggtcacgagcccgagttccatgacgggagccaggcccagggtaaaagttgacacacag
cacggcaaagacctgcaggaagaagatgacgatgatgcgctgagcccggacgactggaaa
gacaaattgagccttgacgtgggcaaaagcagcagcagggaaacctcaagatcgacgtcc
agcaccgtgaagcagaaagtgagcagcgatgacaacatcgcgtcctccgccacacggcga
tgcccagaaccggatgtgcccctgccgcccagcacaatatctttgggcgagctgcacgcc
gtcaccccaatgaaatggtgcccacatctgggtattgtgcgacccttaccctcagctgga
ctgaacgtgtctgaaccgtgcagcgtctgtggcagtgaggacgagaactgggtctgcctc
agctgttacaaggttttctgtgggcgttacgtgaatgagcacatgatgattcacggactg
aagaacgaacactacatggtgctgagctacactgacctctccgcgtggtgctatgggtgt
gattcatatgttcacaacgaggtgctcctcccatccaaagaggaagcacatcggaagaaa
ttcggagaggagttgcacactggagcctga
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