Scyliorhinus canicula (smaller spotted catshark): 119955828
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Entry
119955828 CDS
T11175
Symbol
sptan1
Name
(RefSeq) spectrin alpha chain, non-erythrocytic 1 isoform X1
KO
K06114
spectrin alpha, non-erythrocytic (fodrin)
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Pathway
scau04210
Apoptosis
scau04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
119955828 (sptan1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
119955828 (sptan1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
scau04812
]
119955828 (sptan1)
Cytoskeleton proteins [BR:
scau04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
119955828 (sptan1)
Intermediate filaments
Intermediate filament-binding proteins
119955828 (sptan1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spectrin
EFhand_Ca_insen
SH3_1
EF-hand_7
EF-hand_1
EF-hand_6
SH3_9
EF-hand_8
EF-hand_5
SH3_2
SH3_3
SH3_10
Motif
Other DBs
NCBI-GeneID:
119955828
NCBI-ProteinID:
XP_038638343
LinkDB
All DBs
Position
21:66354333..66479579
Genome browser
AA seq
2474 aa
AA seq
DB search
MDSTGVKVLDSADDIQERRHQVLDRYRRFKELSILRRQKLDDSFGFQCFRRDADELEKWI
QEKLQIASDESYKDPSNLQGKLQKHQAFEAEVQANAGAIIKLDEFGNKMITDGHFASETI
RTRLEELHQLWARLLEKMKEKGIRLLQTQKLVQYQRECDDVMDWINDKEAIVTSEEVGQD
LEHVEVLQKKFEEFQTDLAAHEERVNEVNQLAGKLEQDNHPELVLITHRQDEVNAAWQRL
KGLVQQRQSKLFGAAEVQRFNRDVDETISWIKEKEQLMASDDFGRDLASVQTLLRKHEGL
ERDLAALEDKVKALTSEADRLQQSHPQNAVQIQVKQEELIQNWERIRTLAAQRHTRLDDS
YRLQRFLADFRDLTSWVTEMKALISADELANDVAGAEALLDRHQEHKGEIDAHEDSFKAT
DEAGQALLSGGHYASDEVREKLGILAEEKVSLLDLWELRRHQYEQCMDLQLFYRDTEQVD
NWMSKQEAFLLNEDLGDSLDSVEALLKKHEDFEKSLGAQEEKITALEEFATKLIQSDHYA
KEDVAARRDALLSRRNALHERAMYRRVALENSFSLQQFFRDSDELKSWINEKMKTATDEA
HKDPSNLQGKVQKHQAFEAELSANQSRIDTLQKAGQELIDANHYASDEVTARMNEVISLW
KRLLEATEMKGIKLREANQQQQFNRNVEDIELWLYEVEGHLASDDYGKDLTSVQNLQKKQ
ALLEADIAAHQDRIDGINIQARQFQEGGHFDADNIKKKQETLVGRYEALKDPMVTRKQKL
ADSLRLQQLFRDIEDEETWIREKEPIAASTNRGKDLIGVQNLLKKHQALQAEISGHEPRI
KAVAQKGHAMVEAGHFASEDVKGKLNDLNQKWDSLKAKAAQRRQDLEDSLQAQQYFADAN
EAESWMREKEPVVGSVDYGKDEDSAEALLKKHEALMSDLIAYGSSIQALKEQAQACRQQV
APTDDETGKELVLALYDYQEKSPREVTMKKGDILTLLNSTNKDWWKVEVNDRQGFVPAAY
VKKLDPAQSTSRENLLEDSSSIAMRQEQIDNQALLAKEVGSVVLRMKQVEELYQSILELG
LKRKNMLEKSCKKFMLFREASELQQWINEKESALTSEEVAADLEQVEGLQKKFDDFQKDL
KANESRLRDINKVANDLESEGLMVEEVQVAQEQPLVGSAPGAAKDESDSKSVSPWKTVRL
ATHTVASFNAIKELNERWKSLQQLSEERSHVLGSAHEVQRFHRDADETKEWIEEKNQALN
TDNYGHDLASVQALQRKHEGFERDLAALGDKVNSLGETANRLIQSHPESVEDVQEKCTEL
NQAWDSLGKRADQRKGKLNDSHDLQRFLSDFRDLMSWINGIRGLVSSDELAKDVTGAEAL
LERHQEHRTEIDARAGTFQAFEQFGHQLLARGHYACPEIREKLDILERERADLEKAWIQR
RMMLDQCLELQLFNRDCEQAENWMAAREAFLASDDKGDSLDSVEALIKKHEDFDKAITVQ
EEKIAALQAFADQLIGSEHYAKDDISSRRNEVLDRWRRLKAQMIEKRSKLGESQTLQQFS
RDVDEIEAWISEKLQTATDESYKDPTNIQLSKLLSKHQKHQAFEAELHANADRIRGVIDM
GKSLIGRGACAGSEDAVQARLGTLADQWEYLVNKSAEKSQKLKEANKQQNFNTGIKDFDF
WLSEVEALLASEDYGKDLASVNNLLKKHQLLEADINAHEDRLKDLNGQADSLMSSDAFDT
TQVKDKRNAVNVRFRKIKEMATARRVNLNDSHRLHQFFRDLDDEESWIKEKKLLVSSEDY
GRDLTGVQNLRKKHKRLEAELAAHDPAIQSVLETGKKLSDDNTIGKEEIQQRLAQFVAHW
KELKELASARGQRLEESLEYQQFVANVEEEEAWINEKLNLVASEDYGDTLAAVQGLLKKH
EAFETDFTVHRDRVHDVCANGEELIKKNNHYVENIAAKMKGLRAKVTELEKAAAQRKAKL
DENSAFLQFNWKADVVESWIGEKENSLKTDDYGRDLSSVQTLLTKQETFDAGLQAFQQEG
ITNITALKDQLLAAKHIQSKAIEARHASLMKRWNQLLTNSGERKKKLLEAQEHFRKLEDL
FLTFAKKASAFNSWFENAEEDLTDPVRCNSLEEIKALREAHEAFRSSLSSAQTDFSQLAE
LDHQIKSYRMFSNPYTWFTMEALEETWRNLQKIIKERELELQKEQRRQEENDKLRQEFAQ
HANAFHQWLQETRSCMVEESGTLESQLEATKRKHQEIRAMRSQLKKIEDLGAAMEEALIL
DNKYTEHSTVGLAQQWDQLDQLGMRMQHNLEQQIQARNTTGVTEEALKEFSMMFKHFDKD
KSGRLNHQEFKSCLRSLGYDLPMVEEGEPDPEFEAILDAVDPNRDGYVSLQEYMAFMISR
ETENVKSSEEIESAFRALSSEGKAFVTREELYQNLSREQADYCLSHMKPYTDGKGREIPS
AFDYVEFTRSLFVN
NT seq
7425 nt
NT seq
+upstream
nt +downstream
nt
atggattccacaggggtaaaagttctagattcagcggatgacatccaggaaagacgtcat
caagtgcttgataggtatcggcgattcaaggagctatccattctgagacggcagaagcta
gatgattcttttggctttcaatgtttccgccgtgatgcagatgaattggagaaatggatt
caagagaaactgcaaattgcatctgatgagagttacaaggatcccagcaatctccagggc
aagctacaaaagcaccaggcatttgaggctgaagtgcaagctaatgcaggtgccataatt
aaacttgatgaatttggcaacaaaatgataacagatgggcattttgcatcagaaacgatt
cgaacccggctagaagaactccatcaactatgggcacgcctgctggagaaaatgaaggag
aaggggatccgactcctgcagactcagaagcttgtgcagtaccagcgagagtgtgatgat
gtcatggattggatcaatgataaggaagctattgtgacatcggaagaagttggccaggac
ttggagcatgtggaggttttgcagaagaaatttgaggaatttcagactgatcttgcagct
catgaagagcgcgttaatgaagttaatcaactggctggaaaacttgaacaggacaatcac
cctgagctggtgcttatcacccatcgtcaggatgaggtgaatgctgcttggcagcgactg
aagggcctggtacaacagcggcaaagcaagctttttggagcagcagaggtgcaacgtttt
aatagagatgtggatgagacaattagttggattaaagagaaagaacagctaatggcatca
gatgattttggacgcgacctggctagcgtgcagacacttctccgcaaacatgaaggcttg
gagcgagatcttgcagcactggaggataaggtgaaagcactgacttccgaggcagaccgc
ctgcaacagtcacacccacagaatgcagtccagattcaggtgaaacaagaagagctcatt
caaaactgggagcgaattcgcaccttggcagcacagaggcatacacgccttgatgactcg
tacagactgcagcgtttcctggctgacttccgtgatcttaccagctgggtaactgaaatg
aaagctctcatcagtgctgatgaattagcaaatgacgtggctggagcagaggcattgctt
gacagacatcaggagcacaagggtgagattgatgctcatgaggacagtttcaaggctact
gatgaagcaggacaggccctgctcagcggtgggcactatgcatctgatgaagtccgtgag
aagcttggaatccttgctgaagagaaggtttctctgctagatttatgggaactccgtaga
caccaatatgagcagtgcatggatctgcagctcttctaccgtgacactgagcaggtggac
aattggatgagcaaacaggaggcgttcttgttgaacgaagacttgggagattcactggat
agtgtagaagcacttctgaaaaagcacgaagattttgaaaagtcccttggtgctcaagaa
gagaaaattacggctctggaagaatttgccaccaagttgattcagagtgaccactatgca
aaggaagatgttgcagcacgccgcgatgcgctcctgagccgtcggaatgctcttcatgag
cgtgccatgtatcgacgagtggcattagagaactcttttagtctgcagcagtttttccgt
gactccgatgagctgaagagttggataaatgagaagatgaaaactgccactgatgaagct
cacaaggatccctccaatttgcaaggaaaggttcaaaaacaccaggcttttgaagcagaa
ctttcagccaaccagagtcgaattgatactctacagaaagctggacaagaactgattgat
gctaatcattatgcttcggatgaagtgactgctcgtatgaatgaagtcatctctctatgg
aaaagactgcttgaggccacagaaatgaaaggtattaaactacgtgaagccaaccagcag
caacaattcaaccgcaacgtagaagacattgaactctggttgtatgaggttgaaggtcac
cttgcttcagatgattatggaaaggatttgactagtgtgcaaaacctgcagaaaaaacaa
gcactgctggaagctgatattgcagcgcaccaggaccgtattgatggaattaatatccaa
gcccggcagttccaggaaggtggacactttgatgctgacaatatcaagaagaagcaggaa
accctggttggtcgttatgaggcgttgaaagacccaatggtgactcgtaaacagaaactt
gctgactctctccggcttcaacagctcttccgtgatattgaagatgaagaaacatggatt
cgagaaaaggagccaattgcagcttccaccaacagaggaaaggatttgattggcgtacag
aacttgcttaaaaaacaccaggcactccaggcagagatatctggtcatgaaccacgtatc
aaagccgtagcccagaaaggacatgcaatggtcgaagctggccactttgctagtgaggat
gtgaaaggcaagctgaatgacctgaatcagaaatgggattcattgaaagcaaaggctgca
caaaggcggcaggatttggaagattcgctgcaggctcagcagtactttgctgatgctaat
gaggcagagtcctggatgagggagaaggaacctgttgttggcagcgttgactatgggaaa
gacgaagactccgctgaggccctactgaagaaacatgaagctttgatgtctgatctaatt
gcatatggaagcagcattcaggcactgaaggaacaagctcaagcctgccgtcaacaagtg
gctcccacagatgatgaaactggaaaagaactggttttggccttgtatgattaccaggag
aagagccctcgtgaagtgaccatgaagaaaggggatattcttaccttactaaacagtacc
aacaaggattggtggaaagtggaagtgaatgatcgtcagggctttgttcctgctgcctat
gtcaagaaattggacccagcgcagtctacatcacgtgaaaatctgctggaggattcaagt
agcattgcaatgcgccaggaacagattgacaaccaggctctgctagctaaggaggttggc
agcgttgtgctccgtatgaagcaggtggaggaattataccagtcaattctggaactgggc
ttaaaacggaagaatatgctggaaaaaagctgtaagaagttcatgctttttcgtgaggcc
agtgagctgcagcagtggatcaatgagaaggagtcagcattgaccagtgaggaagtggcg
gctgacctggaacaagtggaaggactgcagaaaaagtttgatgacttccaaaaagatctg
aaagcgaatgagtctcgcctgcgagatattaacaaagtggcaaacgatctggagtcagag
ggtttgatggttgaagaagttcaagttgctcaggaacaacctctcgtgggatctgcccca
ggagctgccaaggatgaatctgactctaaaagtgtgtcaccgtggaagactgtgcggctg
gcaacacatacggtggctagctttaatgccatcaaggaattgaacgagcgctggaagtcc
ctacaacagctgtctgaggaacgcagccatgtcttgggtagtgcacatgaagtgcagaga
ttccaccgagatgctgatgaaaccaaggaatggattgaagagaaaaatcaagctctcaac
actgataattatggacatgacctagcaagtgtccaggctctgcaacgcaaacatgaggga
tttgaacgggatcttgctgctctgggagataaagtgaattctctgggtgaaactgcaaac
cgactgatccaatctcatcctgaatcagttgaggatgtccaagaaaaatgcacagaattg
aatcaggcgtgggacagtctggggaagcgtgctgaccaacgtaaaggaaaattgaatgac
tctcatgatctgcagcgtttcctaagtgacttcagggaccttatgtcctggataaatgga
atccgaggattagtctcttcagacgaactggccaaggacgtgactggagctgaggcccta
ttggagagacaccaggagcatcgtactgaaattgatgccagggctggcactttccaggca
tttgagcagtttggacaccaattgcttgctcgtgggcactatgcttgtccagaaatcagg
gagaagctggatatcctggaacgtgaacgcgcagatctcgagaaagcctggattcagcgc
agaatgatgttggatcagtgtctggagctacagttgttcaaccgtgactgcgagcaagct
gagaactggatggcagcgcgtgaagcattcctggccagtgatgacaagggtgattccctg
gacagtgtggaggccctcatcaagaaacatgaagattttgataaagccattacagtccag
gaagagaagattgcagcactacaagcctttgctgatcagttaattggctctgaacattat
gcaaaggatgatatttcaagtcgtcgcaatgaggtattggacaggtggcgccgcctaaaa
gctcagatgatcgagaagagatccaaactcggagaatcacagaccttacaacagtttagc
cgtgatgtagatgaaatcgaggcctggatcagtgagaagctgcagactgcaactgatgaa
tcttacaaagatcccacaaacattcagctgtccaaactgctgagcaaacaccagaagcac
caagcattcgaagcagagctgcatgccaatgctgatcgaatccgtggggtcattgacatg
gggaaatcactgatcggtcgaggggcatgtgctggtagtgaagatgctgtccaggctcgt
ttgggaacgttggctgaccaatgggagtatttagtgaacaaatcagcagaaaagagccaa
aaattgaaagaggccaataaacagcaaaatttcaacactggaatcaaagactttgacttt
tggttgtcagaggtggaagctctcctggcctctgaggactatggcaaggacctggcgtct
gtgaataacctactgaagaagcaccagcttctggaagcagatattaatgctcatgaggac
cgtctgaaagacttaaatggccaggctgatagtctcatgtccagcgatgccttcgatacc
acccaggtgaaggacaagcgtaatgcagtgaatgttcgatttaggaaaattaaagagatg
gctactgctcgccgtgttaatctgaatgattcacatagacttcatcaattcttccgtgat
ttggatgatgaggaatcctggataaaagagaaaaaattgctcgtgagttctgaagattat
ggtcgggatttgactggagtacagaacttgaggaagaagcacaagcgcctggaagcagag
ttggctgcacatgacccagctatccagtctgtactggagaccggaaagaagctgtctgat
gataatacgattggcaaggaagaaatccagcagcgactggcccagtttgtggcacactgg
aaggaactgaaggaacttgcttctgctcgaggacagcgtttggaggaatccttggagtac
cagcagtttgtggcaaatgttgaggaggaggaggcctggatcaatgagaaactgaatctg
gtggccagtgaggattatggagacacacttgctgcagtgcagggattgctgaaaaaacat
gaagcatttgaaactgatttcactgttcaccgtgatcgagtacatgatgtttgtgctaat
ggagaggaactgataaagaagaacaatcattatgtagagaatattgctgcaaagatgaag
ggattgcgagcgaaagtgacagagttggagaaggcggctgctcagaggaaggcaaagctg
gatgagaactctgcattcttgcagtttaactggaaggcagatgtagttgagtcatggatt
ggtgagaaagagaacagtttgaagacagatgattatgggcgtgatctctcctccgtacaa
acgttgctcacgaaacaggaaacgtttgatgctgggctgcaggctttccaacaggaaggg
atcactaatattacagcattgaaggaccagttactggcagcgaaacacattcagtccaaa
gctattgaagcccgccatgcttcattaatgaaaaggtggaatcagcttttgaccaattct
ggtgaaaggaagaagaaattgcttgaagcacaggaacatttcagaaaacttgaagatctt
ttcttgacctttgcgaagaaggcttcagcctttaatagttggtttgagaatgccgaggag
gacctcacagaccctgtgcgttgcaactctctggaggagatcaaggccctgcgcgaggct
catgaggcttttcgttcatcattaagctcagctcagactgacttcagccaactggctgag
cttgatcaccagatcaagagttatcggatgttttctaacccctacacctggttcaccatg
gaagccctggaggaaacctggagaaacttgcagaaaatcataaaggagcgtgagctggaa
ttgcagaaggaacagaggcggcaggaagagaatgataaattacgtcaggaatttgcgcaa
catgcaaacgctttccaccagtggctgcaggaaaccaggtcttgcatggtggaggaatcg
ggaacacttgaatcgcagcttgaggcaaccaagagaaaacaccaggagattcgggcaatg
aggagtcagctgaaaaagattgaggaccttggggcagctatggaagaagccttgatcttg
gacaacaaatacacagagcacagcactgtgggattggcacaacaatgggaccagctggat
caactgggaatgagaatgcaacataacctggagcaacagatacaggccagaaacacaact
ggcgtaacagaggaagcccttaaagaattcagcatgatgttcaagcactttgacaaagac
aaatcaggacgcttgaaccatcaggaattcaaatcgtgcttgcgctccttgggttatgat
ttgccaatggtagaggaaggagaaccagaccctgaatttgaagctattctggatgctgtt
gatcccaaccgagatggatatgtatcactacaggaatacatggccttcatgatcagcaga
gaaacggagaacgttaagtctagtgaggagattgagagtgctttccgtgcccttagctca
gaaggaaaagcatttgtcacacgtgaagaactctatcagaacctgtcgagggaacaagcc
gattactgcctctcacacatgaagccgtacacggatggcaaaggcagagagattccttca
gccttcgactatgtggaattcacacgatcgctgttcgtgaactag
DBGET
integrated database retrieval system
