Scyliorhinus canicula (smaller spotted catshark): 119956056
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Entry
119956056 CDS
T11175
Name
(RefSeq) AP-1 complex subunit beta-1 isoform X1
KO
K12392
AP-1 complex subunit beta-1
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Pathway
scau04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
119956056
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
scau04131
]
119956056
Membrane trafficking [BR:
scau04131
]
Endosome - Golgi transport
Others
AP-1 complex
119956056
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adaptin_N
Cnd1
B2-adapt-app_C
HEAT_2
HEAT
Alpha_adaptinC2
PDS5
Cnd3
HEAT_GCN1
RTP1_C1
Arm
HEAT_MROH2B_C
HEAT_EZ
XMAP215_CLASP_TOG
NELF-A_N
VPS15-like_hel
Arm_2
API5
FANCI_S3
Motif
Other DBs
NCBI-GeneID:
119956056
NCBI-ProteinID:
XP_038638837
LinkDB
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Position
1:35165780..35283152
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AA seq
957 aa
AA seq
DB search
MTDSKYFTTTKKGEIFELKAELNSDKKEKKKEAVKKVIASMTVGKDVSALFPDVVNCMQT
DNLELKKLVYLYLMNYAKSQPDMAIMAVNTFVKDCEDPNPLIRALAVRTMGCIRVDKITE
YLCEPLRKCLKDEDPYVRKTAAVCVAKLHDINAQLVEDQGFLDTLKDLISDSNPMVVANA
VAALSEIAESHPNSNLLDLNPQTINKLLTALNECTEWGQIFILDCLANYSPKDDREAQSI
CERVTPRLSHANSAVVLSAVKVLMKFMEMLSKDLDYYGTLLKKLAPPLVTLLSAEPELQY
VALRNINLIVQKRPEILKHEMKVFFVKYNDPIYVKLEKLDIMIRLASQANIAQVLAELKE
YATEVDVDFVRKAVRAIGRCAIKVEQSAERCVSTLLDLIQTKVNYVVQEAIIVIKDIFRK
YPNKYESVIATLCENLDSLDEPEARAAMIWIVGEYAERIDNADELLESFLEGFHDESTQV
QLQLLTAIVKLFLKKPTETQELVQQVLSLATQDSDNPDLRDRGYIYWRLLSTDPVAAKEV
VLAEKPLISEETDLIEPTLLDELICHIGTLASVYHKPPSAFVEGSRGVQHKRLPPRSGSN
ESTESPDVAPSATAQPSEQQPAVIPSQGDLLGDLLNLDLGPPVNVPPIPSSTVQMGAMDL
LGGGLDSLMGDETEGLGGDLSGSPAIGAGYGTPAVMPTSLNAPIGGGLSELFDLGGMGMP
SGSFVAPKTIWLPAAKAKGLEISGTFSRRMGHIYMDISLMNKAMQVMTDFAIQFNRNSFG
MAPAAPLQVNAPLAPNQTIEASLPLNTVGPVMKMDPLTNLQVAVKNNIDVFYFSCLYPIN
MLFVEDGKMDRQIFLATWKDIPNENEVQFQIKDCHLNADAVTNKLQSNNIFTVAKRNVEG
QDMLYQSLKLTNGIWILAELRIQPGNPNYTDLELSLKCRAPEVSQHVFQAYEVILKN
NT seq
2874 nt
NT seq
+upstream
nt +downstream
nt
atgacggattcaaagtattttacgacaaccaagaaaggagaaatctttgaactcaaagca
gagctcaacagtgacaagaaggaaaagaagaaagaagcagtgaagaaagtgattgcttca
atgactgttgggaaggatgtcagtgccctctttcctgatgttgttaactgcatgcagaca
gataacttggagctgaagaagctggtgtacctctatctaatgaactatgctaagagccag
cctgatatggcaattatggctgtcaacacttttgttaaggactgtgaagatcccaatcca
cttattagagcgctggcagtaagaaccatgggctgcatccgtgtagataaaatcacagag
tacctgtgtgagcctctgcgaaaatgtctaaaggatgaagatccctatgtgcgaaagact
gctgctgtctgtgtagctaaactgcatgatatcaatgcacagctggtcgaggatcaggga
tttctggacactctgaaggacttgatatctgactccaatccaatggtggtggcaaatgct
gtggcagctctctcagagattgcagagtcccatccaaatagcaacttgttagacctcaac
cctcagactatcaataaacttttaacagccttaaatgaatgtactgaatggggacagata
tttatcctggattgtttagccaattatagcccaaaagatgacagagaggctcaaagcatt
tgtgagcgtgtgacaccacgtttatctcatgctaactcagctgttgtcctgtctgctgta
aaagttctgatgaagttcatggaaatgttgtcaaaagacttggattactatggcactttg
ctgaagaaactggcacccccactagtaacactgctgtctgcagaacccgagcttcaatat
gtggccctcaggaacattaacctcattgtacagaaaaggcctgagattctgaagcatgaa
atgaaggttttctttgtaaaatacaatgatccgatttatgtgaaactggaaaaactggac
attatgattcgcttggcttctcaagccaacattgcacaggttttggcagaattgaaggaa
tatgcaacagaagtggatgttgactttgtacggaaggccgtacgcgcaattggacggtgt
gctattaaagttgagcaatcagcggagcgctgtgtgagcacattacttgacctcattcaa
acaaaggtaaattacgttgttcaggaagccataatagtcatcaaggacattttccgcaag
tacccaaacaagtatgaaagtgttattgctacactttgtgaaaaccttgattcactggat
gaaccagaagcacgagcagccatgatctggatagtgggtgaatatgcagaaagaatcgac
aatgctgatgaattattagagagcttcttggaaggattccatgacgaaagcactcaggtt
caacttcaacttttgacagctattgtgaaactgttcttaaaaaaaccgactgagacacag
gaactggtgcagcaggttctcagcttggctacacaggattctgacaaccctgatctgaga
gaccgtggctatatatactggcgtctactttctacagatccagtagcagcaaaggaagtt
gtgttggcagagaaacccttgatttcagaagaaactgacctgattgaaccaaccctcctt
gatgaattaatttgccacataggaacattggcttctgtgtaccataaaccacccagtgca
tttgtggaaggcagccgtggtgttcagcacaagagactacccccaagatccggatcaaat
gaaagtaccgagagtccagatgttgccccgtcagctactgcacagccttctgagcagcaa
ccagccgtaattccatcccagggagacctgttgggtgatctactgaatctagaccttggt
cctccagtcaatgttccccctatcccctcatcaacagttcaaatgggagccatggacctt
cttggtggtggattggacagtttgatgggcgatgagaccgaagggcttggtggagatcta
agtggaagccctgcaattggtgctggctatggaactcctgcagtcatgccgacatcctta
aatgcaccaattggaggtggcttaagtgaactgtttgatcttggtggaatgggcatgcca
tctggttcttttgtggcacctaaaactatttggttgcctgcagcaaaagccaaaggtctt
gagatttctggcacattttcacgccgcatgggccatatctatatggatatctctttgatg
aacaaagccatgcaagtaatgactgactttgcaatccagtttaacagaaatagctttggc
atggcaccggctgctcccctacaggtcaatgccccacttgcgcctaaccagacaattgaa
gcttccctccctctgaatacagttggtccagttatgaagatggatcccctcaccaaccta
caggttgcagtaaagaataatattgatgtcttctacttcagttgcctgtacccaattaac
atgttgtttgtggaagatggaaagatggatcgacagatctttctggcaacctggaaagac
attccaaatgagaatgaagtacaattccagatcaaagactgccaccttaatgcagatgcc
gtcactaataagcttcaaagcaataatattttcactgttgcgaagaggaatgttgaaggg
caagatatgttatatcagtccctaaaactgaccaatggaatctggattttagcagagctt
aggatccaaccaggcaatcccaattacacggatttggagttatcactgaaatgcagagcc
ccagaggtatcccaacatgttttccaggcatacgaagtaattttgaagaattga
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