Scyliorhinus canicula (smaller spotted catshark): 119956111
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Entry
119956111 CDS
T11175
Symbol
cdhr1a
Name
(RefSeq) cadherin-related family member 1
KO
K16501
cadherin-related family member 1
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
scau04515
]
119956111 (cdhr1a)
Cell adhesion molecules [BR:
scau04515
]
Cadherins
Cadherin related
119956111 (cdhr1a)
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Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
DUF2627
Motif
Other DBs
NCBI-GeneID:
119956111
NCBI-ProteinID:
XP_038638907
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Position
22:complement(12353532..12395730)
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AA seq
862 aa
AA seq
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MKHVAICYQPILLAVTYISLLQADYAPYFYDNEPNSNNGNMAMLSIPEDTPVGSHLYTLN
GTDPEGNAVTYDLTFEPRVKHYFAVEPQTGNITLVEELDREEEAEVEVLVGISDSVNKVV
EKVRILVTDANDESPEFMNTPYTINVPENTPSGASIFKVHAVDRDNGAGGSVTYFLQNMR
KSKFSMDRYSGVLRIKSRVTLDFEKSRAHIVTVIAKDGGGKLRGKYRICSSTAIITINVV
DIQDTPPIFSGTPYFTSVYENTEPGSEVFSVMASDGDLGNPNPIHYTIAHGNDGSFDINS
TSGAITLLQTTKLLQKDVYKLLIQASEMNPDIDVLVSMTALVTIQVVDINNHRPTFYGEN
GPQSQFEVTMYEHPAAGEILRGLKITVNDSDQGANAQFNLRLVGPEGIFRVIPHTVLNEA
QVTIIVEDSAAIDYETFQVFNFKLLAVEADTPEKFSSTADIIIQLMDTNDNIPKFTSEFY
IARIPENSLGGSPVICVTANDADSEIWGEVKYSIYGKGADLFLIHPTSGIIYTQPWAVLD
AEVQSKYSFYIKADDGEGKHSLAEVFVTVLDINDHYPEFDENVLEKVMIIGSPVKVEARD
QDAEEPNNVVDYSIMQADPANVFDIDQATGEIVLKSYIKSLEVIHNITRNKRCQWSLVVQ
AKDRGSPSFSTTAVVRIDITDETSGKGHMADFLLQSKDNPMKALGVVAGIVCFFVILTIL
ISTIMFWRNKKTNRVGPVRRIIQKRPRHKSKTRKSGWFPKKKKSAKRSTGFMVSGANHRF
QNLSAKGNQPPLPLTLPCPPMLPASLNKPDWVLPTVSGSLSPKSHFTHQSKRKASNINTA
LVSELKQRLEKKMNEDASRLYL
NT seq
2589 nt
NT seq
+upstream
nt +downstream
nt
atgaagcatgtcgcgatttgctaccaacccattcttctcgctgtgacatacatctctcta
cttcaagcagactacgctccttatttctatgacaatgaaccaaacagcaacaatggaaac
atggccatgctgagcatccctgaggacacgcctgtaggatcacatctgtacacgttaaat
ggcacagatccagagggaaatgcagtcacttatgacttgacctttgaacccagagtaaaa
cactattttgcagtggaaccacaaacagggaacatcactttggtagaggagttggacaga
gaggaagaagctgaggttgaagtactggtcggcatttctgacagcgtgaataaagttgtc
gaaaaggtgcgaatacttgtaacagatgccaatgatgagagcccagaattcatgaatacg
ccctacaccatcaatgtgcctgagaacaccccttcgggagccagcatattcaaggtgcac
gcggtggacagggacaatggagctggaggcagtgtcacctattttctgcagaatatgcgc
aaaagcaaattttcaatggatcgatacagtggagtccttcgaataaagtcacgtgtaact
ctggattttgagaaatccagggctcatattgttactgttatagccaaggacggtggtggg
aagctgagaggaaagtatcgaatttgctcttccacagccatcattacgatcaatgttgtg
gatattcaggacacccctcccatattttctggaacaccgtatttcacatctgtgtatgaa
aataccgagcctggttcagaagtatttagcgtgatggcctctgatggagatcttgggaat
cccaatccaatccattacaccattgcccacggaaatgatggatcttttgacataaatagc
acaagtggagctattactcttctgcaaaccacaaaactcctccagaaggatgtttacaaa
cttctcattcaggcttcggaaatgaatccggacattgacgtactggtgtctatgacagct
ctggtaacaatccaagtggtggacatcaacaaccatcggcccactttttacggtgaaaat
ggtccacagtcacagtttgaagtcacaatgtacgaacacccagcagcaggagagatattg
cgtggattgaagataacagtcaatgactcagatcagggagcaaacgcacaatttaatctc
aggcttgtgggccccgaaggtatattccgcgtaattccccacactgtccttaatgaagca
caagtcacgattattgtggaggactcagctgccattgactatgaaacattccaagtgttt
aattttaagctccttgctgttgaagcggacactccagagaagttcagttctacagctgac
attatcattcaactcatggataccaatgataacattccgaaattcacttccgaattctac
attgctcggattcccgaaaactccctggggggctctccggttatatgtgttactgcaaat
gatgctgactcagaaatatggggagaagtcaagtattcaatctatggaaaaggggctgat
ctatttctgattcaccccacatcggggattatatacactcagccctgggcagtgctggat
gctgaagtacagtctaaatacagcttttacatcaaagcggatgatggggaagggaagcac
agcttggctgaagtctttgtaactgttctagatatcaatgaccactacccagaatttgat
gagaacgttttggagaaggttatgatcattggatcccctgtaaaagttgaggccagagat
caagacgcagaggagccgaataatgttgttgattactcgatcatgcaggcagatcctgca
aatgtatttgacattgatcaagccacgggggagattgtgttgaagtcctacatcaaatct
ctggaggtcattcacaacattaccagaaacaagaggtgtcagtggtcactggtggtgcaa
gctaaggacagaggctccccttcattcagcaccacagctgttgtgaggatcgacattaca
gatgagacttcgggcaaaggtcacatggcagactttttgttacaatctaaagataatccc
atgaaagccctgggagtagtagctgggatagtttgtttcttcgtcattctcaccatctta
atttcaaccatcatgttttggcggaataaaaagaccaatcgcgttggcccggttaggcgc
atcatacagaaaaggccacggcacaaatcaaagacccgcaaatctgggtggttcccgaag
aagaagaaatctgccaaaagatcaaccggcttcatggtttccggcgctaaccaccgtttt
caaaatttgagcgctaaaggtaaccagccaccactgccgctgaccttgccgtgtccacca
atgctcccggccagtctcaacaagccggactgggttctgcccacagtgtcgggatcgctc
agtccaaagagtcacttcacccaccagtcaaagaggaaggcttcgaacatcaacactgcc
ctggtctctgagctgaaacagcgcctggaaaagaaaatgaacgaagatgcttccagattg
tacttgtga
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