Scyliorhinus canicula (smaller spotted catshark): 119956128
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Entry
119956128 CDS
T11175
Name
(RefSeq) nodal-like
KO
K04666
nodal
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Pathway
scau04060
Cytokine-cytokine receptor interaction
scau04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
119956128
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
119956128
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
scau04052
]
119956128
Cytokines and neuropeptides [BR:
scau04052
]
Cytokines
Transforming growth factors (RSTK binding)
119956128
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
TGF_beta
TGFb_propeptide
Motif
Other DBs
NCBI-GeneID:
119956128
NCBI-ProteinID:
XP_038638948
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Position
22:21938057..21953695
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AA seq
410 aa
AA seq
DB search
MQFPVTVLLTALLSISVAQGNRTGNWTRRVLDTKPGPPPGLREVAAFIKRLEARNISLKL
PSHMVSLYRSYNSGNYTGLSLHERVAEADTVRSLVAKSFHHNGSRWILTFDMSTLAANEK
LQFAELRISVPSFAESCSLLELHHRSEYPCGRATCQDQLFLGSFPPDAVLEDAADCAVYN
VTDILRHWIDRREASRMGGLAGVQRPESPVCRRKRSLPSAQGKTESKETALLLVFSRRPE
QSCTDSSSLLNDATTSKHVSKPRKRKGRRPKQKGQAARQLKRARGRGRGSGVPVHRHPRH
HRQGNDKTKCRRIRFQVKFGKIGWGAWVIFPKMYNAFRCEGECPSPSGEDAKPTNHAYMQ
SLLKFHHPTLVPSPCCVPIKMNPMSMLYMEKGEVVLRHHENMVVEECGCR
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
atgcagttcccagtcacagtgctgctgaccgctctgctttccatctcggtcgcccagggg
aatcgaacaggcaactggacccggcgtgtgctggacaccaagccggggcccccgcccggc
ctgagggaggtggctgcgttcatcaagcgcctggaggctcgcaacatcagcctgaagctg
ccctcccacatggtgagcctgtaccgcagctacaactcgggcaattacaccggcctctcg
ctccacgagagagtggcagaggcggacactgtgcggagcttggtggcgaaaagttttcat
cacaatgggagccgctggattctgacgtttgacatgtccactctggcggccaacgagaag
cttcagtttgccgagttgcgcatcagcgtgccgtcctttgcagagtcctgctctctcctc
gagctccaccaccggtcggagtacccgtgtggccgggctacttgccaggatcagctcttc
ttgggatccttccccccggacgcggtgctggaggacgccgccgactgcgccgtctacaac
gtcactgacatcctgcgccactggatcgaccgcagggaggccagccggatgggcggtctg
gccggggtccagcggccggagagcccggtctgccggaggaagaggtccctgccctccgcc
caggggaagacggagtccaaggagacggcgctgctgctggtgttctccaggaggcccgag
cagagctgcacggacagctcctcactcctaaacgacgccaccacctccaagcacgtgagc
aaaccccggaagaggaaaggccgccggccaaagcagaagggccaggcggcacggcagctg
aagagagctcgcggccggggcagaggaagcggcgttcccgttcaccggcacccccggcac
caccgtcaaggcaacgacaagaccaagtgccggaggatccggtttcaggtcaagtttggg
aagattggctggggagcctgggtcatctttccaaagatgtacaacgctttccgctgtgag
ggagagtgcccgtcgccatcgggggaggatgccaaacccaccaaccatgcctacatgcag
agtctgctcaaattccatcatcccacactggtgccttccccttgctgtgtgcccatcaaa
atgaacccaatgagcatgctgtacatggaaaagggtgaagtggtgttacggcaccacgag
aacatggtggtagaagagtgcggctgccgttga
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