Scyliorhinus canicula (smaller spotted catshark): 119956166
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Entry
119956166 CDS
T11175
Name
(RefSeq) LOW QUALITY PROTEIN: paired box protein Pax-2-like
KO
K15608
paired box protein 2
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
scau03000
]
119956166
04131 Membrane trafficking [BR:
scau04131
]
119956166
03036 Chromosome and associated proteins [BR:
scau03036
]
119956166
Transcription factors [BR:
scau03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
119956166
Membrane trafficking [BR:
scau04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Selective cargos
119956166
Chromosome and associated proteins [BR:
scau03036
]
Eukaryotic type
Centrosome formation proteins
Other centrosome associated proteins
119956166
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAX
Pax2_C
HTH_23
HTH_32
DUF6115
Homeodomain
HTH_Tnp_IS1
Motif
Other DBs
NCBI-GeneID:
119956166
NCBI-ProteinID:
XP_038639018
LinkDB
All DBs
Position
22:26436590..26685864
Genome browser
AA seq
424 aa
AA seq
DB search
MDIHCKADPFSAMHSYSSTWDEFSCVCFAGHGGVNQLGGVFVNGRPLPDVVRQRIVELAH
QGVRPCDISRQLRVSHGCVSKILGRYYETGSIKPGVIGGSKPKVATPKVVDKIAEYKRQN
PTMFAWEIRDRLLAEGICDNDSVPSVSSINRIIRTKVQQPFHSSPDGPVAAVTAPGHTIV
PSTNSPPVSSASNDPVGSYSINGILGIPRSNGETKRKRDEDAQDNSGPNGDSQGTAESVR
KQLRNEAFAQQQLEALERVFERQHYSDVFSAGEHIKSEQANEYSLSALASGLEDVKSSLT
ASATPDLGTNVSGPQSYPVVTGRDMASTTLPGYPPHVPPTGQGSYSTSTLAGMVPGSEFS
GNPYTHPQYTTYNEAWRFTNPGLLMPHPGVQHPRLLPLPTIATSYYGNHMKLQDDSLGLH
IVPV
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atggacatacattgcaaagcagaccctttctcggctatgcacagttacagttcaacctgg
gatgagttcagttgtgtgtgttttgcagggcacgggggtgtgaatcagctgggaggagtg
tttgtgaatggcaggcctctgcctgacgtggtgaggcagcgcattgtggaacttgcacat
caaggggtccgaccctgcgacatctcacgccaactgcgggtcagccacggctgtgtgagc
aagatactgggcaggtactatgagacgggcagcatcaagcccggagtcattgggggctct
aagcccaaggttgccaccccgaaagtagtggacaagattgccgagtacaagcggcagaat
ccaacaatgttcgcgtgggagattcgtgaccgactgctggccgaggggatttgtgacaac
gacagtgtgcccagcgtcagctccatcaacaggatcatacggaccaaagtgcagcagcct
tttcattcttcaccggatggaccagtcgcagcggtcactgcaccggggcacacaatcgtc
cccagcacaaattctccgcctgtatcctcagcatccaatgatcccgtgggatcatactcc
atcaacgggattctgggcattccgcgatcgaatggcgagaccaagaggaaacgggatgaa
gatgcccaagataattccggcccaaacggtgattctcagggaactgcggagagtgtacgg
aagcagctgcgaaacgaggcctttgcccagcagcagttggaagccctggaacgggtgttt
gaacgtcagcactattcagacgtcttcagcgctggagaacacatcaaatcggaacaggct
aatgagtattccctgtcggccctggcctctggattggaagacgtcaagagcagcctgaca
gcctccgccactcctgaccttggcaccaacgtttcaggaccccagagctaccctgttgtg
acaggccgtgatatggcgagcacaactttacctggctatcctccacatgttccacccact
gggcaaggcagttactccacctccacattggctggcatggtaccaggcagtgaattttca
ggaaacccttatacccatccacagtacacaacttataatgaagcctggcgtttcaccaac
cctggattactaatgccgcatccaggggtacagcacccccgactgctgccactgcctacg
atcgccactagttactatggcaaccacatgaaactgcaagatgactctctcgggctccac
attgtaccagtctga
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