Scyliorhinus canicula (smaller spotted catshark): 119956188
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Entry
119956188 CDS
T11175
Symbol
rgra
Name
(RefSeq) retinal G protein coupled receptor a
KO
K04254
retinal G protein coupled receptor
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
scau03037
]
119956188 (rgra)
04030 G protein-coupled receptors [BR:
scau04030
]
119956188 (rgra)
Cilium and associated proteins [BR:
scau03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
119956188 (rgra)
G protein-coupled receptors [BR:
scau04030
]
Rhodopsin family
Vision
Opsin
119956188 (rgra)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
7tm_1
7TM_GPCR_Srx
7TM_GPCR_Srsx
Motif
Other DBs
NCBI-GeneID:
119956188
NCBI-ProteinID:
XP_038639064
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Position
22:complement(12287326..12303745)
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AA seq
295 aa
AA seq
DB search
MVTTEPSIEGFTELEVFALGTALLLEALLGLLLNAITLLSFYKIKELQTPSNLLVASLAV
SDSGICLNAFVAAFSSFLRYWPYGTEGCQTHGFQGFLASLASINACAAIAWDRYHLSCSR
SRLQWKSTVIVLSIIWGFAAFWAAMPLLGWGEYDYEPLRTCCTLDYSKGDRKFVSFFIPM
AFFEFAFPLFILVTSYQSCASKFKKTGQTKFNTGLPFKTLIICWGPYSLLCMYAVIGNVT
VISPKLRMLPAVLAKTSPVANAFVYALGNPDYRGGIWSFLTGQKMEPIEMDGKVK
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
atggtaactaccgaaccatcgattgagggattcactgagctggaagtgttcgcattgggc
accgctctgttactggaagctcttctcggactgctcctgaacgccataacattgttgtcc
ttttacaagataaaagaactccagacaccaagtaatcttctcgtggccagcttggctgta
tccgactctgggatttgcctgaatgcatttgtagctgctttctcaagctttctgaggtac
tggccttatggaactgaaggctgccagacccatggtttccaaggatttctagcatccctg
gcaagcattaatgcatgtgctgccattgcctgggacaggtaccatctaagctgcagtagg
tcaagactgcaatggaagagtacagtgattgtcctatcaattatctggggatttgctgca
ttctgggccgctatgccgttattgggatggggtgaatatgactacgaaccattgagaact
tgctgcactttggattactccaaaggtgacaggaaatttgtctcattcttcattccgatg
gcttttttcgaatttgcctttccacttttcatcttggtaacttcttaccagtcatgtgcg
agtaaattcaagaaaactggacaaaccaagtttaacactggattgccttttaaaacccta
ataatttgctggggaccgtatagtttgttgtgcatgtatgctgtcattggaaatgtgact
gtcatatctccaaaactgcgaatgcttcctgccgtccttgcaaagacatccccggtagcc
aatgcctttgtctacgctctagggaacccagactacagaggtgggatctggtccttccta
acgggacagaaaatggaacccattgaaatggatggaaaagttaaataa
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