Scyliorhinus canicula (smaller spotted catshark): 119956276
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Entry
119956276 CDS
T11175
Name
(RefSeq) serine/arginine-rich splicing factor 3-like
KO
K12892
serine/arginine-rich splicing factor 3
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Pathway
scau03040
Spliceosome
scau05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
119956276
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
119956276
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
scau03041
]
119956276
Spliceosome [BR:
scau03041
]
Common components
Common spliceosomal components
SR proteins
119956276
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_7
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
119956276
NCBI-ProteinID:
XP_038639278
LinkDB
All DBs
Position
23:8424205..8440384
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AA seq
170 aa
AA seq
DB search
MLEDFLRIFNSRAMMRRDSCPLDCKVYVGDLGTNGNKTELERSFSYYGPLRNVWVARNPP
GFAFVEFEDPRDAADAVRELDGRTLCGVRVRVELSSGERRKRYRGPPPPWTRRPRYDEYR
HRSPQRRRYSRSRSRENRRRERSISRDRERREPSRSFSRSHSRSRSLERK
NT seq
513 nt
NT seq
+upstream
nt +downstream
nt
atgttggaagattttctgagaatattcaacagccgagcaatgatgcgtcgtgattcatgt
ccacttgactgcaaggtctatgtgggtgacctcgggaccaatggaaacaagaccgagctg
gaacgctcattcagctactacgggcctctacgcaacgtctgggttgcgcggaacccgcct
ggctttgcgtttgtcgaattcgaggacccccgtgatgcagcggatgccgtacgagagttg
gatggcagaacattgtgtggagttcgtgtccgagtggagctgtcctctggtgaaaggagg
aagcgctatcgtgggccaccaccaccctggacaagacgcccacgttatgatgaatatcgc
catcgcagcccacaacgtagacgctactcaaggtctcgctccagggagaatcggcgtcgc
gagcgttccatttctcgggacagagaaaggcgcgagccatcaagatctttctccaggtca
cacagtcgctccaggtccttagagaggaagtag
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