Scyliorhinus canicula (smaller spotted catshark): 119956307
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Entry
119956307 CDS
T11175
Name
(RefSeq) zinc finger and BTB domain-containing protein 20-like isoform X1
KO
K10501
zinc finger and BTB domain-containing protein 20
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
scau03000
]
119956307
04121 Ubiquitin system [BR:
scau04121
]
119956307
Transcription factors [BR:
scau03000
]
Eukaryotic type
Zinc finger
Cys2His2 BTB-ZF factors
119956307
Ubiquitin system [BR:
scau04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul3 complex
Adoptor and target recognizing subunit (BTB)
119956307
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BTB
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_6
zf-C2H2_jaz
zf-C2H2_15
BTB_KLHL33
zf-met
zf-Di19
zf-C2H2_2
zf-UBP
B129_C2H2-zf
zf-Vps39_C
DUF5810
Zf-C2H2_ZNF451
BolA
DUF2225
Zf-C2H2_ZNF451_2nd
zf-LYAR
zf-C2H2_16
Motif
Other DBs
NCBI-GeneID:
119956307
NCBI-ProteinID:
XP_038639325
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Position
23:complement(1289742..1303156)
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AA seq
754 aa
AA seq
DB search
MRPKTKIKAVTPWASIENNTTCWMGRIEGVSHCPRACSQGAPHCPKVCSEIAPHCPWASS
EGVPHCPKVCSEVAPHCPWASSEGTPLCLRYATAVPAKCLTLNRNPTIWSLSHSCLWDFA
VHKLAAGFSTIQQGLCFKRLWRAVCGSRMSEQLHSINLQNFSRSLLETLNSQRLGGHFCD
VTVRIHNTALRAHRCVLAAASPFFHDKLLLGYSEIEVPPLVSAQTLRRLVDFMYSGSLMV
SHVEALQILTAASVLQIKTIIDECTRIISQNAPQKTPGFQSFVSHKMDLSDEKEAIICQT
VSDQMHKFPMGLIETALSPHGTEKEFDFVRAGAKNMVTSEAGYKSEEISPSLNRQLPSTR
QKGAAEQALPDQENLSLMDTSRNSEVRALWYNTAANQRPDMSLLPQGSHSRKQRQPIRLQ
MADGSQVTIKEEDDDLLYCGESISGATISDQSTEQISQGEQTEDISEANAFDPDQNTIGE
PRDSASHLNLSGKGDELEFFSASDLLPEELKSFWQGEREEKEPSLQQNRKADCKSQLDAS
YPRPSTFMQDFLPGSTMQTTPRNQACSVQYDQADTGGTTSHRNLFQMNLPQSPHLATLPS
TSQTCLPSISTQPPCQNAPVFLDGTQTVPAASQASQSASETEKKPYGCTQCGKTFSSRQN
YAKHMFVHTGEKPHQCSVCWRSFSLRDYLIKHMVTHTGVRAYQCPVCNKRFTQKSSLNVH
MRLHRGEKAFECHVCNKRFSHKTLLERHMATHII
NT seq
2265 nt
NT seq
+upstream
nt +downstream
nt
atgaggccaaaaacaaaaatcaaggctgtcacaccctgggccagtattgagaataacact
acctgttggatgggcaggattgagggcgtgtcgcactgtccaagagcctgtagtcaggga
gcgccacactgtccgaaggtctgtagtgagatagcgccccactgtccgtgggccagtagt
gagggtgtgccacactgtccgaaggtctgtagtgaggtagcgccccactgtccgtgggcc
agtagtgagggaacaccgctctgtctgaggtacgccactgctgtcccagccaaatgtttg
accctcaatcgcaacccaactatctggtcattatcccacagctgtttatgggattttgct
gtacacaaattggctgctgggttttctacaatacaacagggactatgtttcaaaaggctt
tggcgtgcagtgtgtgggagcagaatgtctgagcaacttcacagcatcaacctccagaac
tttagcaggtcgctgctggagacactaaactcccagcgcttgggtggccacttctgcgat
gtgacagtgcggatccacaacacagctctccgagcccaccgctgtgtcctggctgccgct
agcccctttttccatgataagctgttgttgggttacagcgaaattgaggtcccgcccctc
gtctcagcccagactctgcgccggttggtggattttatgtacagtggctcgctgatggtt
tctcacgtggaggctctgcaaatcctcacggcagctagtgtcctccagatcaaaaccatc
atcgatgaatgcacacgtattatttcacaaaatgcccctcaaaagactccgggattccaa
tcgttcgtcagccacaaaatggacctttctgatgaaaaggaagccattatttgccaaaca
gtcagtgaccagatgcacaagtttcccatgggactgattgaaacagcgttgtcaccccat
gggactgaaaaagagtttgattttgtgcgcgccggtgcaaagaacatggtaacaagtgaa
gcaggctacaaatcggaagaaatcagccccagtctgaacaggcagttaccatctacccga
cagaagggagcggcagagcaggctctacctgaccaggagaacctgtctctgatggacacc
agccgtaacagtgaggtacgcgctctgtggtacaacactgcagccaatcagcggcccgac
atgtcattgttgccgcaaggtagccatagccgcaaacaacgccagccaatccgtctgcag
atggcagacggaagtcaagtgaccatcaaggaagaagatgatgacctcctttactgtggg
gagagcatttccggagccactatctctgatcagtcaaccgagcagatcagtcaaggtgaa
cagactgaggatatttctgaggcaaatgcatttgaccccgaccagaatacaataggggaa
ccaagggactctgccagtcatttgaatttgagtggtaaaggggacgagttagaatttttt
agtgctagtgatctcttacctgaggagctgaagtccttttggcagggagaaagagaggag
aaggagccctccttgcaacaaaaccgtaaagcagactgcaagtcccaactcgatgcctca
tacccacggccttcgacattcatgcaagactttctaccaggatctaccatgcagaccacc
ccgaggaaccaggcgtgctctgtgcagtatgatcaggcagacacaggtggcaccaccagt
caccgaaacctcttccagatgaatcttcctcagtcccctcatcttgcaactttgccctcc
acctcccagacatgcctgcccagcatttcaacccagccaccttgccagaatgcccccgta
ttcctggatgggacccagactgtgccagctgcttcacaggccagccagagtgccagtgaa
acggagaaaaagccctacggatgcacgcaatgcgggaagaccttcagctccagacagaac
tatgccaagcacatgtttgtccacacaggtgagaaaccccatcaatgcagcgtgtgttgg
cggtcattctcgcttagggactacttgataaagcacatggtcacacatacaggagtgcga
gcgtaccagtgcccggtgtgcaataaacgcttcacacaaaagagctccttgaatgtgcac
atgcggctacatcgtggtgagaaggccttcgagtgtcatgtctgtaacaagcgtttctct
cacaagactctactggagaggcacatggccacgcacattatataa
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