Scyliorhinus canicula (smaller spotted catshark): 119956630
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Entry
119956630 CDS
T11175
Name
(RefSeq) tumor necrosis factor ligand superfamily member 13B-like
KO
K05476
tumor necrosis factor ligand superfamily member 13B
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Pathway
scau04060
Cytokine-cytokine receptor interaction
scau04672
Intestinal immune network for IgA production
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
119956630
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
119956630
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
scau04052
]
119956630
04090 CD molecules [BR:
scau04090
]
119956630
Cytokines and neuropeptides [BR:
scau04052
]
Cytokines
Tumor necrosis fators
119956630
CD molecules [BR:
scau04090
]
Proteins
119956630
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TNF
Motif
Other DBs
NCBI-GeneID:
119956630
NCBI-ProteinID:
XP_038639898
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Position
23:complement(17115282..17116389)
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AA seq
291 aa
AA seq
DB search
MKADGGKAGIDVAHRCLIYSACVLTTAALLSASMAAVALHHVLALKAEISSMREELGRYK
YRLEQLGSWARGTEEGQAANWSRLAGQAGGLRGGTPASSREKPAEGEGRFRGGRSLPDPV
RQSFVQLIATANGRPVARASRCQKCIAGRHQQACRVERRPFANRNQVEETTIPWILSLRK
GGALEKTGDKISVRETGYFLVYSQVWYKDDTFTMGHLIKRIKASIVGNEPQSAILFRCIQ
NMPACCPNNSCFTAGIAKLEVGDELELIVPRGQAHIALTGDGTFFGVLKLS
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atgaaagcggacggaggaaaggccggcatcgacgtagcccaccgatgtttgatctactca
gcctgcgtcttgaccacggcagctctgctctccgcctccatggcggctgtggcgttgcac
cacgtcctcgccctcaaggcggagatctcgtccatgagggaggagctggggcggtacaaa
taccggctggagcagctggggtcctgggcgcgaggaaccgaggaggggcaggcggctaac
tggagccggctggcgggccaggccggcgggcttcgcgggggaacgcccgccagcagccgg
gagaaacccgcagagggggaagggagattccgagggggaaggtcgcttcctgatcccgtg
cggcagtcgtttgtgcagctgatcgcgacggctaatggaaggccggtggccagagcgagc
cgttgccaaaaatgcatcgccggaaggcaccagcaagcttgtcgagttgaacggaggccg
tttgcaaatcgcaaccaggtagaggagacgactatcccgtggattctcagcctgcgtaaa
ggaggcgcccttgagaagacgggtgataaaatctctgtgagagaaactggttactttctg
gtttacagccaagtgtggtataaggacgatacattcacaatggggcatctcatcaaaagg
ataaaggcaagcatcgtcggcaatgagccacagagtgcgatcctcttccggtgtatccaa
aacatgcccgcctgctgcccaaacaactcctgcttcaccgctggcattgccaagctggag
gtgggcgatgagcttgaactcatcgtaccacgcggccaagcccacattgccttaactgga
gacgggacattcttcggggtgttaaaactgtcataa
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