Scyliorhinus canicula (smaller spotted catshark): 119956712
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Entry
119956712 CDS
T11175
Symbol
fan1
Name
(RefSeq) fanconi-associated nuclease 1
KO
K15363
fanconi-associated nuclease 1 [EC:3.1.21.-
3.1.4.1
]
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Pathway
scau03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
119956712 (fan1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
scau03400
]
119956712 (fan1)
Enzymes [BR:
scau01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.1 phosphodiesterase I
119956712 (fan1)
DNA repair and recombination proteins [BR:
scau03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
Other FA pathway factors
119956712 (fan1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAN1_TPR
VRR_NUC
Fan1_SAP
FAN1_HTH
SAP
Motif
Other DBs
NCBI-GeneID:
119956712
NCBI-ProteinID:
XP_038639977
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All DBs
Position
24:746598..771206
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AA seq
720 aa
AA seq
DB search
MITVIGLEGAVQGTLTEGPGGPGRGEGPGGLGRGEGPGRGEGPGGPGQGEGLLGLGQGEG
PLGLGRTDGFPLPYYLRNFLIALQAVLRSEDKELFDEGDALWLGMFQNLSAAGQMLYVRL
FQRKLKWLKVIKLSYAEIGEDLTPTIEELRLAGLLQTGSELCDVSEALDLLSAPELKLLA
KSFHLRTQGQRAEILKSLLRLAKQQSIFSSKQKPSSPGLTILNRAKAVIGHCVRVAALGR
AVFSRLLLLFNLTDWTDEEEVSSPGRSPLSTLLKVNMGHVTFPSYTVQREKKIFQHRDDL
LRYTEAVHSLAEVGCAVANGTWSEALHLCKTARETWIQLEKSSDVGFHQDLPVYLRCFTA
GWVYTRIRYRGVEILQRLHMYEEAVEELQSLLEQSTYCLESRGHWWNRLTLNLHQHLKRT
DQAIHCLWKGLDDVWVHTGYRLALYQRALRIRDSPSCRKWHHLLQDVPVMRVEDVPHVTI
KGRTCPGMGNALFLMSDPSEGPNLGQGEPCSTVICSVEEISLAHYKQQGFDQGIHGEGAT
FLTLFGLLFWDIIFLSGIPDVFRNPYQAGPLDLYTDCFYQHRKTPIESRVEFLQDAPIET
LHRLITEVWDNHRDTTTTLINWRIFSSLQQAQSLVSCLGSLFLSGICSILAKDLRHSRGG
LPDLVVWNSHSLQYKLAEVKGPSDQLSHKQMVWLDQLRRLGADVEVCHVSAVGARSYKLS
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atgataacagttattggtttggaaggtgctgtgcaaggaactttgactgagggtcccggg
ggtccgggccggggtgagggtcccggggggctgggccggggtgagggtcccggccggggt
gagggtcccgggggtccgggccagggcgagggtctcttagggctgggccagggtgagggt
cccttggggctgggccggacggacggtttcccgctgccttattatctgaggaatttcctg
attgcgctgcaggcggttctccggagtgaagataaagaactttttgatgaaggagacgcg
ctctggttgggaatgttccagaatctctcagctgccgggcagatgctctatgtgcgactc
tttcaacggaagctgaaatggctaaaagtgataaaactgagctatgcagagattggtgag
gatctaacccccaccatcgaggagctgcggctggcaggcttgttacagacagggtcggag
ctctgcgatgtctccgaggccctggacctgttgtcagctcctgagctcaaactattggct
aaaagcttccacctgcgaacccagggtcagagggcagagattctgaagtccctgctacgt
ttggccaaacagcaatcgatcttcagcagtaaacagaaaccgtccagtcccggcctcacc
atcctcaacagggcgaaggcagtgatcggacattgtgtccgagtggctgcattgggccgc
gctgtgttctcacggctgttgctacttttcaacctgacggattggacggatgaagaggag
gtttccagccctggccggagtccgctgtccacattactcaaggtcaacatgggtcacgtc
acattccccagttatactgtccagagggagaagaaaatattccagcacagagatgatctg
ctcaggtacactgaggccgtgcattctcttgctgaggtgggatgcgccgtggccaacggg
acctggagtgaagctctccacctttgtaaaactgccagggagacgtggatccagctggag
aagagcagtgacgttgggttccaccaggatctcccggtgtatctgcgatgtttcaccgca
ggctgggtctacacacggatccgataccgcggggttgaaattttacagcgactgcacatg
tatgaggaggcagtggaggaattgcaaagtcttttggaacaaagcacctattgtctagag
agccgtggccactggtggaatcgactgactctgaatctccatcaacatttgaaacggacg
gatcaggccattcactgtttgtggaaaggtttggacgatgtgtgggttcacacgggatat
cgactggctctataccagagggctctgcggatacgcgattctcccagctgcaggaaatgg
catcaccttcttcaggatgtgccagtgatgagagtggaagacgtgccgcatgtgacgata
aagggcagaacgtgcccagggatgggcaacgccttgttcctgatgtcagaccccagtgaa
gggccaaatctgggccaaggggagccttgctctacggtgatctgttccgtggaggagatt
tctctggcgcactataagcagcaaggcttcgatcagggaattcacggtgagggagccaca
ttcctgacactattcggacttctcttctgggatatcatctttctgtctggaatcccagat
gtttttcgaaatccctatcaggctggtcctctcgatctctacactgactgcttctatcag
caccggaagacgcccattgaatcgagggtggagttcctgcaggatgcacccatagaaacc
ctgcacagacttatcactgaggtctgggacaatcacagagacacaactaccacattaatc
aactggaggatattcagctctcttcaacaagcccagagtctggtgagctgtctggggagc
ctgttcctgagtggcatctgcagcattctggccaaagacttgaggcacagccgggggggg
ctccctgatctcgttgtctggaacagccacagtctccagtacaagctggcagaagtgaaa
ggaccgagtgaccaactctcccacaagcagatggtgtggctggaccagctgcggagactt
ggggctgacgttgaagtttgccacgtcagtgcagttggagcacggagttacaaactcagc
taa
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