Scyliorhinus canicula (smaller spotted catshark): 119956788
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Entry
119956788 CDS
T11175
Name
(RefSeq) threonine--tRNA ligase 1, cytoplasmic-like
KO
K01868
threonyl-tRNA synthetase [EC:
6.1.1.3
]
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Pathway
scau00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
119956788
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
scau01007
]
119956788
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
scau03016
]
119956788
Enzymes [BR:
scau01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.3 threonine---tRNA ligase
119956788
Amino acid related enzymes [BR:
scau01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
119956788
Transfer RNA biogenesis [BR:
scau03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
119956788
Prokaryotic type
119956788
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
HGTP_anticodon
tRNA_SAD
TGS
Motif
Other DBs
NCBI-GeneID:
119956788
NCBI-ProteinID:
XP_038640136
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Position
24:complement(246995..302342)
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AA seq
786 aa
AA seq
DB search
MAAVVAFELRLAAQEAELRQLRAATERLQRGTEELVIGPELQCLREENEKLKYRRLHLER
SVRAELRRGRSSAQGSGVQTEVDSQQLDRQLKNKKDENSPTGGEAKSIEWSEWPPYVEER
FQLYERLKREHDSMLSEQAARDSRIITITLPNNMQIRGESWRTTPYQVACQISRRLAESS
IIAKVGDELWDLDRPLEGDTSLQLLNFEDPAARAVYWHSSAHILGEAMERYYGGCLCYGP
PIETGFYYDMFLEDRGVSSDQFPYLENICKSIIKDCQPFERLEVSKQTLLEMFKYNKFKV
RILNEKIETLTTTVYRCGPLIDLCSGPHVRHTGKIKAMRIYKKSLTYWEGKSNMETLQRI
YGISFPDDKMLKEWEQLQEEAKNQDHRKIGQEQELFFFHPLSPGSCFFLPRGASIYNTLT
TFIREEYCRRGFTEVVSPNIYNSRLWEMSGYWQHDSENMFSFEVEKEVFALKPMNCPGHC
LMFDYRPRSWRELPLRFADFGVLHRNEPTGELTGLTRVRRFEQDDAHIFCTIEQIEEEIR
GCLVFLRSVYGVFGFSFQLNLSKRTEVFLGDVNLWNQAEKQLECCLDEFGESWRLSDGDE
ALPGPKIDIEIKDALDRNHQCATIQLDFQLPIRLNLTYVSKDGMDGSRPVIIHRAVLGSL
ERMMAILAENYAGKWPFWLSPCQIVVIPVGSGCEEYGRMVCQEFVEAGFMADVDLDPGCL
LNKKIRNSQLAQYNFILVVGEREKANNSVNVRTRDNKVHGELSVAATIEKMKRLKQLRRV
RAEEEF
NT seq
2361 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgtggttgctttcgagctgcgcctggctgcgcaagaagcggagctccggcag
ctcagagccgccacggagcggctccagcggggcaccgaggagttggtcatcggcccggag
ctgcagtgcctcagagaggagaatgagaaactcaaataccggcggctgcatctggagcga
agcgtgcgggcggagctgaggagaggccggagctcagcgcagggctccggggtccagact
gaggttgattctcagcagctggatcggcagctcaagaacaagaaggacgagaacagtcca
actggaggagaagccaaatcaatagagtggagcgagtggccaccctacgttgaggaacgt
ttccaactttatgagcgtctcaaacgggagcatgattccatgctcagtgagcaggctgca
cgggactctcgaattatcaccatcacgctgccaaacaacatgcagattcgtggggaatca
tggaggacaacaccatatcaggtcgcttgtcaaatcagccgaagattagcggagagttcc
attattgccaaggtgggtgatgagttgtgggacctggatcggccgctggaaggagatacc
agtcttcaactgttaaactttgaagacccagcggcgcgagctgtatattggcactcgagt
gcgcacattctgggagaagccatggagcggtattatggaggatgcctatgttacgggcca
cccatagagactggattctattatgacatgttcctggaagacagaggagtgtccagtgac
cagtttccttacctggagaatatctgtaagtcgatcattaaagactgtcagccatttgag
agattggaggtcagcaagcaaactttgcttgaaatgttcaagtacaacaagtttaaggtg
cggatattaaacgagaagattgagacactgaccaccacagtgtacaggtgtggcccattg
attgatttgtgcagtggaccccacgtcaggcacactggcaagattaaagccatgagaatt
tataagaaatccttgacatactgggaaggaaagtccaacatggagactctgcagagaatc
tacgggatctcatttcctgatgacaagatgctgaaggagtgggagcagttgcaggaggaa
gccaagaaccaggaccacagaaagattggacaggaacaggaattgtttttcttccatccg
ctcagccctggaagctgtttttttctcccgagaggggcttctatttacaacacgctgaca
acatttatacgggaggagtattgtagacgtggattcactgaagtggtctctccaaatatc
tacaacagccgcctgtgggagatgtctggctactggcagcacgacagtgagaacatgttc
agctttgaggtagagaaggaggtttttgcgctgaagcctatgaattgcccaggtcactgt
ttgatgtttgactatcgcccgcgttcctggcgtgagctccctctgcgttttgccgatttt
ggtgttcttcatcgcaacgaaccaacaggggagttaaccggattaaccagagtgcggcga
ttcgaacaggacgatgctcacatcttctgtacaatagagcagattgaggaggagatccgg
ggatgcctggtcttcctccgctcagtgtatggagtgtttggctttagtttccagctcaac
ctctccaaacggacagaggtgtttcttggagatgtgaacttgtggaatcaggctgaaaag
cagttggaatgctgtttggatgagtttggcgagagctggagactgagtgacggagatgaa
gcattgcctggaccaaagattgacattgagataaaggacgctctagaccgaaaccatcag
tgtgcaaccatccagctggatttccagctgcccatacggcttaatctgacttacgttagt
aaggatggaatggatggaagccgcccagttattattcatcgcgctgtgctggggtcgctg
gaacgcatgatggcaattcttgctgagaactacgccgggaaatggccattctggctgtcc
ccctgtcagattgtggtgatacctgttggatcaggttgtgaggagtatggtcggatggtt
tgtcaagagtttgttgaagctggtttcatggccgatgtggacctggatcctggctgtttg
ctgaataagaaaatccggaattcacaacttgctcagtacaatttcatcttagtagtcgga
gagagagagaaagccaataattcggtaaatgtccgtacaagagataacaaggtacacggt
gagctttctgtggcagcaactatcgagaaaatgaagaggctgaagcaactgcgcagagta
agggccgaagaggagttttaa
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