KEGG   Scyliorhinus canicula (smaller spotted catshark): 119956840
Entry
119956840         CDS       T11175                                 
Symbol
wdr61
Name
(RefSeq) WD repeat-containing protein 61 isoform X1
  KO
K12602  WD repeat-containing protein 61
Organism
scau  Scyliorhinus canicula (smaller spotted catshark)
Pathway
scau03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:scau00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    119956840 (wdr61)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:scau03019]
    119956840 (wdr61)
Messenger RNA biogenesis [BR:scau03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Ski complex
     119956840 (wdr61)
SSDB
Motif
Pfam: Beta-prop_WDR5 Beta-prop_EML_2 WD40_Prp19 Beta-prop_WDR3_1st WD40 Beta-prop_THOC3 WD40_WDHD1_1st Beta-prop_WDR3_2nd WD40_CDC20-Fz WDR55 Beta-prop_WDR36-Utp21_2nd WD40_Gbeta EIF3I Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd ANAPC4_WD40 Beta-prop_CAF1B_HIR1 Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_1st Beta-prop_WDR36-Utp21_1st Beta-prop_WDR75_1st Beta-prop_TEP1_C Beta-prop_EML Beta-prop_IFT122_1st Beta-prop_RIG_2nd WDR90_beta-prop_4th Beta-prop_ACSF4 Beta-prop_SCAP Beta-prop_WDR19_1st Beta-prop_VPS8 Beta-prop_Aladin Beta-prop_WDR35_TULP_N eIF2A Beta-prop_Vps41 WD40_RFWD3 Beta-prop_WDR41 Beta-prop_DCAF4 Beta-prop_EIPR1 NBCH_WD40 Beta-prop_Nup120_160 Beta-prop_NWD2_C Cytochrom_D1 Ge1_WD40 Tricorn_2nd Beta-prop_SPT8 PROPPIN Beta-prop_HPS5 Beta-prop_IFT140_1st Beta-prop_WDR75_2nd WDR54 Beta-prop_NUP159_NUP214 Beta-prop_RIG_1st WD40_like WD_LRWD1 Beta-prop_DCAF12 B-prop_COPA_B_2nd Vgb_lyase Beta-prop_pof12 Nucleoporin_N
Other DBs
NCBI-GeneID: 119956840
NCBI-ProteinID: XP_038640248
LinkDB
Position
24:complement(17792065..17804159)
AA seq 305 aa
MSTQYSILFKHEHAHEDSIWSVAWGKSDKDSSETIVTGSLDDLVKVWKWADEKLELQWTL
EGHQLGVVSVDINHTGTTAASSSLDAHIRLWDLESGKQIKSLDAGPVDAWSVAFSPDGRF
LATGSHLGKVNIFGVESGKKESSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATG
KLLHTLEGHAKPIRSLTFSPDSQLLITASDDGYIKIYDVQHASLAGTLSGHGSWVLSVAF
CPDDAHFVSSSSDKSVKVWDASSRSCVHTFFDHLDQVWGAKYNGNGSKIVSVADDREIHI
YDCPT
NT seq 918 nt   +upstreamnt  +downstreamnt
atgagcacccagtacagtatcctattcaaacacgagcatgctcatgaagactctatctgg
tctgtggcttggggaaagagtgacaaggatagctcggagaccatagtgaccggatcgctt
gatgaccttgttaaagtctggaaatgggcagatgagaagctcgagctccagtggactcta
gagggacaccagctgggagtcgtgtcggttgacattaatcacactggcaccactgcagcc
tccagttccctggatgcacatatccgcctttgggatttagagtcaggcaaacagattaag
tctttggatgctgggccagttgatgcctggtctgtggccttctctccagacggcaggttt
ttggcaacagggagtcacttggggaaagttaatatctttggcgttgaaagtggaaagaaa
gaatcttccttggatacaagaggaaaattcatcctcagtattgcatatagtcctgatggg
aagtacctcgccagtggtgctatagatggtatcatcaacattttcgatattgcaactgga
aaactgctgcatacgctggaaggtcatgccaagccaattcgatctctgactttctctcca
gactctcagcttctaattacagcctctgatgacggttacatcaagatttatgatgtccaa
catgccagtcttgcaggtaccctaagcggccacggatcctgggtactgagtgtggctttc
tgcccagatgacgcgcattttgtatccagctcttctgacaaaagtgtaaaggtttgggat
gctagctcaagaagttgtgtgcacacattcttcgatcacttggaccaggtctggggcgcc
aaatacaatgggaatggatccaaaatagtctctgttgcagatgatcgggagatccatatt
tacgactgccccacctga

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