Scyliorhinus canicula (smaller spotted catshark): 119956855
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Entry
119956855 CDS
T11175
Name
(RefSeq) neogenin-like isoform X1
KO
K06766
neogenin
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Pathway
scau04350
TGF-beta signaling pathway
scau04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
119956855
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
119956855
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
scau04515
]
119956855
Cell adhesion molecules [BR:
scau04515
]
Immunoglobulin superfamily
DCC/UNC5 family
119956855
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Neogenin_C
fn3
I-set
Ig_3
Ig_2
ig
Pur_ac_phosph_N
Ig_DSCAM-DSCAML_C
V-set
Interfer-bind
C2-set_2
Ig_5
Tissue_fac
Ig_4
C2-set_3
SusE
Sp38
GBS104-like_Ig
ASFV_J13L
EphA2_TM
Arylsulfotran_N
TMEM154
Motif
Other DBs
NCBI-GeneID:
119956855
NCBI-ProteinID:
XP_038640290
LinkDB
All DBs
Position
24:1205075..1429807
Genome browser
AA seq
1492 aa
AA seq
DB search
MLGIVRRSPPVLADPSSRSRPIPAPAPALPAPSPDTGGERPRPEAGRMAETRPRILLLLA
ALSTATGTESVVRTFTPFYFTVEPADTLAIRGSSVILNCSVFSEPSAKIEWRKDGTFLNL
VSDERRQMLPEGSLLIRSVVHSKHHKPDEGFYQCVATIDSLGTIVSRTAKMTVTGLPRFS
GQPQAVSVHQGDTALLGCEVNGDLVPFVSWEHSQQLVVLEGRFLKLPNGHLEIGNVSDSD
AGSYCCSVETAGLSKTSEETELTVLPEIGAERKMTFLQPPVSVSKVAGQTVILPCVVSGY
PTPTIHWTQNSEIILERFQKFTLVGSGSLQISDVTEDDSGIYDCIAESGNETLHAQAELS
VQVPPHFLNRPVNIYAHESMDIVFECEVTGIPMPTVKWIKNGDMVIPSDYFKIVNERNLQ
VLGLVKSDEGLYQCVAENDVGNERASAQLIILEHDVPIPTFTPPSLTSATADHLAATTTG
LLPSAPRDVMALLVSTRFIKLTWRPPADPNAEILTYSVYYSRDGINRERVEDTSRPGDLE
VTIGELMPDVKYVFRVVAHNKHGAGESSAPFKVATQPEVQVPGPAQNLVAQANSPTSITV
TWQEPHSDNGPIANYKLYYMEKGAGSEQDVDVGSLSYTMNGLKKFTEYSFRVVAYNKHGP
GVSTEEVVATTYSGVPSAPPQNVTLEVRNSKSIVVHWQPPPPGTHNGVITGYNIRYKKGG
RRGETDTTGGSQLSQIIDGLERNTEYSFRVSAITVNGTGPSSDWVSAETFESDLDESRVP
DKPSSLHVRPLINNIVVSWTPPDNQNIVVRGYAIGYGIGSPHAETIRVDYKQRYYTIENL
EPNSHYVITLKAYNKIGEGIPLYESTATRPLTDPFDPSKVYIFDLVNNPYTPVPDPSPML
PPVGVQATVLTHDTIRVTWADSSLPKNQKITDARFYTVRWKTNYPANTKYKTADTTTLSY
IVSGLKPNTLYEFSVKVTKGRRSSTWSMTAHGTTFETVPTSPPKDLTVVSKEGKPRTIIV
NWQPPSEANGKITGYIIYYSTDITAEIHDWVIEPVVGDRLTHQIQDLTLDTTYYFKIQAR
NSKGMGPLSDFVQFRTPKALGSSGKLGKNPSVLDSGSDTRHSISGHNSPHGSPTSSLDSN
TMLIIIISAGVFTIIIVVIIALFCTRRTNYQQKKKRAACKSANGSHKYKGNSKDINPPDL
WIHHERLELKPIDKSPEPNPVMTDTPIPRNSQDITPVENSMEKEQQRRNSYLGRELEDGI
TTLNGRRGLRPKMMMPFDAQPPQPVISAHPIHSLDNPHHHHHCDGPSPPARSYFRHQISS
RPLDSAVERANSAESVRNTPNSDMSPAPSSQAHPVENVETDVPAVSYLPGSQEEESNRNV
PTAHVRPSHPLKSFAVITIPPASTSYETTSSSTPLLSQTGTNPQVQSVKTASIGTLGRSR
SPMAVTVPSAPELAESTKMLEDSDSNYGPDELTEEMTHLTGLMKDLNVITTA
NT seq
4479 nt
NT seq
+upstream
nt +downstream
nt
atgctgggtattgtccgccggtccccgccggtcctggccgatcccagctcccgctcccgg
ccgatcccagctcccgctcccgctctcccagctccttccccggacacaggcggcgagcgg
ccccggcccgaggccgggaggatggcggagacccgaccgcggatcctgctgctcctggcg
gcgctgagcacggccaccggcacagaatctgtcgtccgaacgtttacccctttctacttc
acggtggagccagcagacacactggcgatacgcgggtcctccgttattctgaactgttca
gtgttctctgaacccagtgccaaaattgaatggagaaaagatgggacattcctgaacctt
gtttcggatgaacgcaggcagatgcttccagaaggttccctgttgatccggagtgtggtc
cattctaaacaccacaaacccgatgaaggattttatcaatgcgtcgccaccatcgatagc
ctggggaccattgtgagcaggactgccaagatgacagtgacaggtcttcctcggttcagc
ggtcagccccaagctgtctccgtgcaccaaggcgacaccgccctgttaggctgtgaggtg
aatggtgatcttgttccatttgtgagctgggaacacagccagcagctcgtggtgttggaa
ggaaggttcctcaagctgcccaatggccacctggaaatcggcaatgtctccgacagcgat
gctgggtcatattgctgctccgtagaaacggcaggcctctccaaaacgagcgaagagaca
gagcttacggttttaccagagataggtgcagagcgaaagatgacgtttctccagccacct
gtttctgttagtaaagtggcaggccagactgtaatattaccatgtgtggtctctggctac
ccaacacccaccattcattggacccagaattcagagattattttggaaagattccaaaag
ttcactttggttggaagtggcagcctgcagatcagtgatgtcacagaggacgattctggg
atttacgactgtatcgcagagtctggcaatgagacgctgcatgcacaggcagagctcagt
gttcaagttccccctcacttcctgaatcgtccagtcaacatttacgctcacgagtccatg
gacattgtgtttgaatgcgaagtgaccggaataccaatgcccaccgtgaaatggataaag
aatggagacatggtgatccccagtgattatttcaagattgttaatgagcggaacctgcag
gttcttggtctggtgaagtccgacgaaggcctgtaccagtgtgtggcggagaacgacgta
gggaatgaacgggccagcgcccagctcatcatcctggagcatgatgttcccattcccaca
tttacccctccctcactgacaagtgccactgctgaccatctagcagccaccactaccgga
ctcttgccctctgcacctcgagatgtgatggccctcctcgtctccacgcgcttcatcaag
ctgacatggcgtccgcctgcagacccgaatgcagagatcctcacctactccgtctactac
tccagagatggcatcaacagggaacgtgtggaagacacaagtcggcctggtgacctggaa
gtgacgattggtgagctgatgccagatgtgaaatatgttttccgagtggtcgctcacaac
aagcatggagcgggagagagctctgctcctttcaaagtggccacccaacctgaagttcaa
gttccaggaccagctcagaatctggttgcacaagcaaactcgccgacctcaatcactgtc
acttggcaggagcctcactcggacaatgggccaatcgcaaactacaaactctactacatg
gagaagggagcagggagtgaacaggatgtggatgtcgggagtctatcctacaccatgaat
gggctgaagaagttcaccgagtacagtttccgggtggtggcttacaacaaacatgggcct
ggtgtctccactgaggaggtggtggcaacgacctattctggtgtccctagtgcaccccct
cagaatgtcacgctggaagttcgcaattccaagagcattgtggtgcattggcagccacct
cctcctgggacgcacaacggtgtgatcaccggttacaatattcgatacaagaagggaggt
cgtcgcggggagacggacactacgggagggagtcagctttctcagataatcgatggattg
gaaagaaacactgagtacagcttcagagtctctgccattacagtgaatggcacggggcca
tcctcagactgggtgtctgctgaaacctttgaaagtgacctagatgaatcccgggtgccg
gacaagcccagctccctccacgttcgccctctgattaacaacattgttgtgagctggacg
ccccctgataaccagaacattgttgtgcgaggttacgccattggctacggcattggcagc
cctcatgcagaaaccatccgtgtcgactataaacagcgttattataccatcgagaacctg
gagcccaactcgcactatgtgatcacacttaaagcgtataacaagattggagaagggatt
cctctgtatgagagcacagccaccaggcctctgactgacccttttgacccttccaaagtt
tatatatttgatcttgtcaataatccatacactccagtaccagaccccagccccatgctg
cccccggtcggagttcaggccacggtgcttacccacgacaccatccgggtcacgtgggcc
gacagctcgctgcccaagaaccagaagatcaccgatgcgcgattctacacggtgcgctgg
aaaaccaactatcctgccaacactaagtataagactgcagacaccactacactgagttat
attgtctcaggattgaaaccaaatacactctacgagttttctgtcaaggtaacaaagggt
cgaaggtcgagtacctggagcatgacagcacacggaactacattcgaaacagtgccgaca
tctcctccgaaggatctcacagtcgtgagcaaggaaggaaaaccgaggaccatcattgtg
aactggcagccaccatcagaggccaacgggaaaatcacaggttacatcatatattacagc
acagatattactgcagaaatccatgactgggtgattgagccagtggttggagacagactg
acccaccagatacaagatctcacacttgacaccacttattacttcaaaatccaggctcgt
aattccaaaggcatggggcccttgtctgattttgtccagttccgcacacccaaagctctt
ggatcatctggaaaactcggcaaaaacccttcggttctggattcgggctccgacacccgg
cattctatcagcggtcacaacagtccccatggcagccccacctcgagcctggatagcaac
accatgctcattatcatcatctctgcgggagtcttcacaatcatcattgtggtcatcatc
gctttgttctgtactcgacgcacaaactaccagcagaaaaagaaacgtgcagcttgtaaa
tctgccaatggatctcacaaatataaaggaaattcaaaggatatcaacccccctgatctc
tggatccaccacgaacgcctggagctgaaaccgattgacaagtcaccagagccaaacccg
gtcatgacagacacccccattccccgtaattcccaggacattactccagtcgaaaattcc
atggagaaggagcagcagcggaggaattcctacctgggccgtgaactggaagatggcata
accacgctgaacgggcgacgaggactgcgaccaaagatgatgatgccttttgatgctcag
cctcctcagcctgtgattagtgcccatcccatccattcactcgacaatcctcatcaccat
caccactgtgacgggccttcacccccagctcgcagctactttcgccatcagatcagcagc
cgcccgcttgactccgcagtagaaagggccaattctgcagaatctgtacggaatacacca
aatagcgacatgtccccagcgcccagttcgcaggcccaccctgtggagaacgtggagact
gacgtacctgcagtttcctatttgcctgggtctcaggaggaggagtccaatcgcaatgtc
ccaacagcccatgtacgtccatcccacccactgaaaagctttgctgtgattaccattcct
ccagccagcaccagctatgaaacaacatcatccagcacgccattactgtctcagacagga
accaaccctcaggtacaatcagtgaagacggcatcaataggaacattggggaggagcaga
tctccgatggcagttactgtacccagcgcaccagagcttgcagaatccactaaaatgctg
gaggattcggatagtaattacggcccagacgagctgacagaagagatgacgcatctgacg
gggttaatgaaggatctgaatgttatcactacagcatag
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integrated database retrieval system
