Scyliorhinus canicula (smaller spotted catshark): 119957069
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Entry
119957069 CDS
T11175
Symbol
farsa
Name
(RefSeq) phenylalanine--tRNA ligase alpha subunit
KO
K01889
phenylalanyl-tRNA synthetase alpha chain [EC:
6.1.1.20
]
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Pathway
scau00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
119957069 (farsa)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
scau01007
]
119957069 (farsa)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
scau03016
]
119957069 (farsa)
Enzymes [BR:
scau01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
119957069 (farsa)
Amino acid related enzymes [BR:
scau01007
]
Aminoacyl-tRNA synthetase
Class II (U)
119957069 (farsa)
Transfer RNA biogenesis [BR:
scau03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
119957069 (farsa)
Prokaryotic type
119957069 (farsa)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_2d
PheRS_DBD3
PheRS_DBD1
PheRS_DBD2
tRNA_synthFbeta
tRNA-synt_2
MarR_2
tRNA-synt_2b
ARM_FBXO47
HTH_11
DUF2540
Motif
Other DBs
NCBI-GeneID:
119957069
NCBI-ProteinID:
XP_038640633
LinkDB
All DBs
Position
25:complement(9600396..9633194)
Genome browser
AA seq
495 aa
AA seq
DB search
MAAERELLLGLQEAEGGGLDSGELAVRLGLDHQLLVGAVKSLQTLGDVIEAELRSSKHWE
LTEEGKEIVEKGSHEARVFDSIPPNGIAQSDLMKLPSGKVGFNKAMSNKWIRIDKSAKGG
PRIHKATNCIEDVVKNKLLLIQQRKDSSLDDKEKNELKKRKLLSEVTLKTYWITKGSSFT
TTVVKQDTELTPEMIANGSWREKKFKPYNFDAMGIMPECGHLHPLMKVRTQFRQIFLEMG
FTEMPTNNFIESSFWNFDSLFQPQQHPARDQHDTFFLSEPAIATKFPMDYLERVKRVHSE
GGYGSQGYKYDWKIEEAQKNLLRTHTTAVSARMLYKLAQNEVFAPVKYFSIDRVFRNETL
DATHLAEFHQIEGVVADYDLTLGDLMGVLQQFFNKLGISKLRYKPAFNPYTEPSMEIFSY
HEGLKKWVEVGNSGVFRPEMLLPMGLPENVTVIAWGLSLERPTMIKYGINNIRELVGHKV
NLQMVYDSPVCRLDS
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggagcgcgagctgctgttggggctgcaggaggcggagggcggcggcctggac
agtggggagctggccgtccgactcggcctcgaccaccagctgctggttggcgccgtcaag
agcctgcagaccctgggcgacgtgattgaggcggagctgcgatccagcaagcactgggag
ctgactgaggaagggaaagagattgtggagaaaggcagtcatgaagcacgtgtctttgac
tcgattccaccgaatggaattgctcagagtgacctgatgaaactcccgagtggaaaagtg
ggattcaacaaggccatgtccaacaagtggatccgcattgacaagagtgccaaaggggga
ccacggatccataaggctaccaattgtattgaagatgttgtcaaaaataagttgctgctg
atccagcagaggaaggacagcagcctggacgacaaggagaagaacgaactgaaaaagagg
aagctgctcagtgaggtgactctgaagacctactggatcactaaaggaagctcatttacc
accacggtggttaaacaagatactgagctcaccccagagatgatagccaatggttcatgg
agagagaagaagttcaagccgtacaactttgacgccatgggcatcatgccggagtgtggc
cacctgcatcccttgatgaaagtccgaacacagttccgacagatattcctggaaatgggt
ttcacagaaatgccaaccaataacttcatcgagagctcattctggaactttgactctctt
ttccaaccacagcaacacccagcccgagaccaacatgacacattctttctgtctgagcca
gccattgcaacaaaatttccaatggattaccttgagagggtaaagagagtccattcagag
ggtggctatggatcccaggggtataaatatgactggaagattgaggaggcgcagaagaat
ctcttgcgaacacatacaacagctgttagtgcacggatgctgtacaaacttgcccaaaat
gaagtgttcgcaccagtgaagtatttctccatcgaccgggtcttccgtaatgaaacactg
gacgccactcacttggcagagtttcaccagattgagggggtggtagcagattatgatctg
actctgggcgatctgatgggagtcctccaacagttcttcaacaaacttggtataagcaaa
ctgcgttacaagccagccttcaacccctacacagagccgagtatggagatcttcagctat
catgaaggattgaagaagtgggtggaagttggaaactctggtgttttccgccccgagatg
ctgcttcctatgggtctaccggaaaatgtgaccgtgattgcttggggcctctctctcgag
cggccaaccatgatcaagtacggaatcaacaacatccgcgaactggtgggtcacaaggtg
aacctgcagatggtgtacgatagcccagtctgccgcctggactcctag
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