Scyliorhinus canicula (smaller spotted catshark): 119957076
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Entry
119957076 CDS
T11175
Name
(RefSeq) serine/arginine-rich splicing factor 5-like isoform X1
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Pathway
scau03040
Spliceosome
scau05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
119957076
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
119957076
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
scau03041
]
119957076
Spliceosome [BR:
scau03041
]
Common components
Common spliceosomal components
SR proteins
119957076
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
RRM_5
RRM_occluded
Nup35_RRM_2
SET_assoc
DUF515
Motif
Other DBs
NCBI-GeneID:
119957076
NCBI-ProteinID:
XP_038640658
LinkDB
All DBs
Position
2:complement(110345329..110358660)
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AA seq
274 aa
AA seq
DB search
MLDSHWRSEETLYSRSAKMSARVFIGRLSPYATEKNVERFFRGYGRIKEIDLKNGFGFVE
FEDYRDAEDAVYELDGKELCNERVTVEHARARNRGGRGGGGRYQGRFSQSYQRSGGRNGP
PVRTENRVIVENLSSRVSWQDLKDFMRQAGEVTFADAHRHKMNEGIVEFASYSDVKNALE
KLSGTELNGRKIRVVEERKQRRSRSRSRSRSRSSSRSRSRGRKSYSRSRSRSRSKSRSES
RSPVPSKEQRGHSSMASGDHVRSRTRSPSGESTD
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
atgttggactcacactggagatccgaggaaacgttatattctaggtcagcaaagatgagt
gcccgagtattcattggcagactgagcccttacgccactgaaaaaaatgtggagaggttc
ttcagaggatatggacgaattaaggaaattgatctgaaaaatggatttggatttgtggag
tttgaagattacagagatgcagaggatgcagtttatgaactggatggaaaagagttgtgc
aatgaaagagtgacggtggagcatgccagagcacgcaataggggaggacgaggaggaggg
ggacgttatcaaggtcgctttagccagagctatcaacgcagtggaggaaggaatggtcct
ccagttcgtacagaaaacagagtgattgttgagaacttgtcttccagagttagctggcag
gatctgaaagatttcatgagacaggctggagaagttacctttgcggatgcacacaggcac
aaaatgaatgaaggaattgttgaatttgcctcctacagtgacgtgaagaatgcccttgag
aagctctctggcacagagctgaatggaagaaagatcagggtggttgaagaacgtaagcag
cgcaggtctcgtagcaggtctcgttctcgcagtcgaagctcttctagatctcgctccagg
gggcgtaagtcctatagtcgctccaggagtaggagccgcagcaaatcccgatctgagagt
agatcgcctgttccttccaaggagcagagaggccattcctcaatggcatctggggatcat
gtaagatcacgcacacgttcaccatctggtgagagtacagactaa
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